RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Rnf138rt1Q9D9M9 248 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gml2G5E8L7 176 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gm3138K7N754 218 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ctnna2Q61301 953 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ugt1a9Q62452 528 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 SpopQ6ZWS8 374 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ppm1eQ80TL0 749 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Klhl7Q8BUL5 586 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ccdc15Q8C9M2 810 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Olfr393Q8VGR6 312 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Q922C1 641 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Pidd1Q9ERV7 915 aa27.43■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tatdn2B7ZNL9 783 aaKnown RBP27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Rgs22G3UYX5 1258 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Birc5O70201 140 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Klra1P20937 262 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 PuraP42669 321 aaKnown RBP27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 TdgP56581 421 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Fam193bQ3U2K0 892 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Odr4Q4PJX1 447 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 RetsatQ64FW2 609 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gpr156Q6PCP7 798 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Lsm8Q6ZWM4 96 aaKnown RBP27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Crybg3Q80W49 1005 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 4933409G03RikQ8C5U0 320 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 CarfQ8VHI4 689 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Thumpd2Q9CZB3 528 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 TtpalQ9D3D0 343 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Lrrc63A6H694 637 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Pex5O09012 639 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 PkmP52480 531 aaKnown RBP27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Psmc4P54775 418 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Eef1dP57776 281 aaKnown RBP27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 GaaP70699 953 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Snx25Q3ZT31 840 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Specc1Q5SXY1 1067 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gucy2gQ6TL19 1100 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Fbxo33Q8VE08 562 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 PirQ9D711 290 aa27.42■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gucy2dA0A0U1RPR8 1117 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Fbf1A2A870 1173 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Skint7A7XV04 395 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ctnna1P26231 906 aaKnown RBP27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Mmp3P28862 477 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Srrm1Q52KI8 946 aaKnown RBP27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ublcp1Q8BGR9 318 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Agap1Q8BXK8 857 aaKnown RBP27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Fam228aQ8CDW1 299 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Polr2bQ8CFI7 1174 aaKnown RBP27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Olfr385Q8VGT1 312 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tom1l1Q923U0 474 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Efcab12V9GXH0 673 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Syngap1F6SEU4 1340 aa27.41■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Rap1gapA2ALS5 663 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ptp4a2O70274 167 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ift20Q61025 132 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Avpr1aQ62463 423 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Adcy2Q80TL1 1090 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Pramel7Q810Y8 479 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gimd1E9PW74 217 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Gm20503G3UZK1 150 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Hoxc8P09025 242 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Zfyve28Q6ZPK7 905 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Fam160b1Q8CDM8 764 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tdrd7Q8K1H1 1086 aaKnown RBP27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tbc1d13Q8R3D1 400 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Cpne8Q9DC53 577 aa27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 PollQ9QXE2 573 aaKnown RBP27.4■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Wdr81Q5ND34 1934 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 StrnO55106 780 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Slc12a2P55012 1205 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Kcnq1P97414 668 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Lrch2Q3UMG5 773 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Atg9bQ6EBV9 922 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 PrcpQ7TMR0 491 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Vat1lQ80TB8 417 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Q8BGC1 442 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Snx17Q8BVL3 470 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Syf2Q9D198 242 aaKnown RBP27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 1700123K08RikQ9D991 295 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Rasgrp1Q9Z1S3 795 aa27.39■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Osbpl9A2A8Z1 736 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup10A2BIN1 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup14A2CEK7 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup19A9C497 187 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup15A9R9W0 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Slc16a6B1AT66 607 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup17B5X0G2 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ptchd4B9EKX1 904 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Scgb2b7D3YYY1 112 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup8E9PVW0 235 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Dnajc21E9Q8D0 531 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Prdm15E9Q8T2 1174 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup7E9QA79 235 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup6P02762 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup1P11588 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mup2P11589 180 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tbxas1P36423 533 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cdh8P97291 799 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Wdr41Q3UDP0 460 aa27.38■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms