RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Lrrn2Q6PHP6 730 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Trim65Q8BFW4 522 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Iqcb1Q8BP00 598 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Hgh1Q8C3I8 393 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 TraipQ8VIG6 470 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pcdha9Q91Y11 979 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Desi2Q9D291 194 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gtf3c6Q9D8P7 227 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Fam217aQ9D9W6 419 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Tlr6Q9EPW9 795 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 B4galt4Q9JJ04 344 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Dnajb7Q9QYI8 312 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Oaz3Q9R109 243 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Irs2P81122 1321 aa13.3□□□□□ -0.28
Trim50-202ENSMUST00000111180 Igkv10-96A0A140T8M1 115 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Osbpl7A2A716 963 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Wdr72D3YYM4 1114 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gimd1E9PW74 217 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 PtproE9Q612 1226 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Tnfrsf18O35714 228 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pgk1P09411 417 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 SpoplQ2M2N2 392 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Lrig2Q52KR2 1054 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 ItgaeQ60677 1167 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 CybbQ61093 570 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Mrps31Q61733 384 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 FtoQ8BGW1 502 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Depdc1bQ8BH88 529 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pkn2Q8BWW9 983 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Serpina3bQ8BYY9 420 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Rint1Q8BZ36 792 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Zfp120Q8BZW4 436 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 MtrrQ8C1A3 696 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Tceal5Q8CCT4 200 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Olfr393Q8VGR6 312 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Csde1Q91W50 798 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Creb3l3Q91XE9 479 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Tubb4aQ9D6F9 444 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gtf2h1Q9DBA9 547 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Trim54Q9ERP3 366 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Trpc3Q9QZC1 836 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Rnf25Q9QZR0 456 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Dnajc12Q9R022 198 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Arih2Q9Z1K6 492 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Igkv18-36A0A075B5M9 114 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ptpn3A2ALK8 913 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ube3aO08759 870 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 DtnbO70585 659 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Defa-rs12P50716 91 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ctnnb1Q02248 781 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Rhox12Q4TU81 186 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Snx19Q6P4T1 997 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Zfp251Q6PCX8 632 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pabpc4Q6PHQ9 660 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 PoliQ6R3M4 717 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Asic3Q6X1Y6 530 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Mrgprb8Q7TN51 330 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Olfr23Q7TRX4 325 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Znf12Q7TSI0 686 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Daam2Q80U19 1115 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pan2Q8BGF7 1200 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Hook3Q8BUK6 718 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ttc39bQ8BYY4 617 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Slc26a6Q8CIW6 758 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Eif4a3Q91VC3 411 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Nmrk1Q91W63 195 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ddx27Q921N6 760 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Zfp64Q99KE8 643 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 TheglQ9DA15 459 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Nkx2-4Q9EQM3 354 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Sertad2Q9JJG5 309 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Hyou1Q9JKR6 999 aaKnown RBP13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Klra17Q9JMA4 273 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gfpt2Q9Z2Z9 682 aa13.29□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gm45861A0A1B0GRY3 1923 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 2210011C24RikA0A087WQ89 206 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Vmn2r121A2BE32 847 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Gm10110D3Z5M2 615 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Zfp408H7BX78 710 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 4930544D05RikJ3QK56 214 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 PargO88622 969 aaKnown RBP13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Yme1l1O88967 715 aaKnown RBP13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 mt-Co3P00416 261 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 ZfxP17012 799 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Rad23aP54726 363 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pcsk1P63239 753 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Sparcl1P70663 650 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Mark3Q03141 753 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Ttc39dQ0VF76 604 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Hace1Q3U0D9 909 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Cracr2aQ3UP38 310 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 FancbQ5XJY6 703 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Enpp3Q6DYE8 874 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 NrcamQ810U4 1256 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Fbxo46Q8BG80 603 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Npas4Q8BGD7 802 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Lrrc45Q8CIM1 670 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Pnma3Q8JZW8 466 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Setd3Q91WC0 594 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 B3galt6Q91Z92 325 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms