RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Tnfrsf18O35714 228 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ctnnal1O88327 731 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Wnt10bP48614 389 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Vamp7P70280 220 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cpa1Q7TPZ8 419 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 MogsQ80UM7 834 aaKnown RBP12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rhot1Q8BG51 631 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Usp37Q8C0R0 979 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tmem145Q8C4U2 746 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tnpo2Q99LG2 887 aaKnown RBP12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Lonrf2B2RT44 518 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 AunipE9Q6Z5 340 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cyp4f40G3UW81 524 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gad2P48320 585 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nub1P54729 614 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rnf216P58283 853 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 SnrpfP62307 86 aaKnown RBP12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Wdr18Q4VBE8 431 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pdzd4Q9QY39 772 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gon4lQ9DB00 2260 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Apba3O88888 571 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 RcvrnP34057 202 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 St3gal1P54751 337 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Yipf3Q3UDR8 347 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ksr1Q61097 873 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Grid1Q61627 1009 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Caskin2Q8VHK1 1201 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Snapc2Q91XA5 359 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pcdha2Q91Y17 948 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ivns1abpQ920Q8 642 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nop56Q9D6Z1 580 aaKnown RBP12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 PrkceP16054 737 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rad54lP70270 747 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pou6f1Q07916 301 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ppm1jQ149T7 507 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Srd5a1Q68FF9 255 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cypt2Q6P924 180 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Prr18Q6PAN7 307 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rab44Q8CB87 725 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Kdm1bQ8CIG3 826 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tdrd1Q99MV1 1172 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ripk2P58801 539 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 ChukQ60680 745 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ago2Q8CJG0 860 aaKnown RBP12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cables1Q9ESJ1 568 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 PygmQ9WUB3 842 aaKnown RBP12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 StrcQ8VIM6 1809 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Bcorl1A2AQH4 1781 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Per1O35973 1291 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Fgfr2P21803 821 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Kcnn2P58390 839 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Casp7P97864 303 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nlrp4eQ66X19 978 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rbm12b1Q80YR9 836 aaKnown RBP12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Sh2d5Q8JZW5 429 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Zbtb44Q8R0A2 453 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rnf14Q9JI90 485 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 Clec4aQ9QZ15 238 aa12.17□□□□□ -0.46
Vps54-202ENSMUST00000109578 2210011C24RikA0A087WQ89 206 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cst8P32766 142 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Bace1P56818 501 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Apol7cQ8C6E1 369 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Acot11Q8VHQ9 594 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Dnajc18Q9CZJ9 357 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cst12Q9DAN8 128 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 AuhQ9JLZ3 314 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cntn6Q9JMB8 1028 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rnf25Q9QZR0 456 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Slfn8B1ARD8 910 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rbp3P49194 1234 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Srebf2Q3U1N2 1130 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ece1Q4PZA2 769 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Dync1li2Q6PDL0 492 aaKnown RBP12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Stkld1Q80YS9 662 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Siglec10Q80ZE3 688 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Fbxl5Q8C2S5 690 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 ClasrpQ8CFC7 668 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cdk5rap3Q99LM2 503 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 FibpQ9JI19 357 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cyth1Q9QX11 398 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Slc22a3Q9WTW5 551 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ripor3A1L3T7 938 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Lrrc63A6H694 637 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Akr1b7P21300 316 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rfx2P48379 717 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Runx2Q08775 607 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Kmt5aQ2YDW7 349 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Spdye4aQ5IBH6 268 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Sema5bQ60519 1093 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Stip1Q60864 543 aaKnown RBP12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 HlcsQ920N2 722 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Armc9Q9D2I5 817 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tmem174Q9DCX7 243 aa12.16□□□□□ -0.46
Vps54-202ENSMUST00000109578 Spata31d1aE9QA35 1336 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 Trove2O08848 538 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ptp4a2O70274 167 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 GckP52792 465 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ppp1r12cQ3UMT1 782 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 Phc1Q64028 1012 aa12.15□□□□□ -0.46
Vps54-202ENSMUST00000109578 Trmt13Q8BYH3 481 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms