RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ppp2r2cQ8BG02 447 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ndufaf7Q9CWG8 436 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Klhl40Q9D783 621 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Capn10Q9ESK3 666 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 PigoQ9JJI6 1093 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gadd45gQ9Z111 159 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm4756A0A140LIS8 335 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm45713A0A1B0GS68 446 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ptpn3A2ALK8 913 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Aoc3O70423 765 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Becn1O88597 448 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Serpinh1P19324 417 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 NntQ61941 1086 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Snx19Q6P4T1 997 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cetn1P41209 172 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Znf800Q0VEE6 662 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fam109bQ14B98 259 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Trim72Q1XH17 477 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cd163Q2VLH6 1121 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Hhla1Q3TYV2 514 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mindy4Q3UQI9 744 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 CochQ62507 552 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cep70Q6IQY5 616 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fam109aQ8BH49 266 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Kank2Q8BX02 843 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rem2Q8VEL9 341 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 CactinQ9CS00 772 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mageb16Q9CWV4 363 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mzb1Q9D8I1 188 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Scn1aA2APX8 2009 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Olfr1354E9Q5G9 310 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cpsf2O35218 782 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Oaz1P54369 227 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Grm2Q14BI2 872 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cracr2aQ3UP38 310 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Bbof1Q3V079 533 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rnf168Q80XJ2 565 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lrrc45Q8CIM1 670 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Champ1Q8K327 802 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Calml4Q91WQ9 153 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fam49bQ921M7 324 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Oxct1Q9D0K2 520 aaKnown RBP10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Psma7Q9Z2U0 248 aa10.62□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ttc3O88196 1979 aaKnown RBP10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm4302E9PX25 294 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mroh4G3X8W1 983 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Myl1P05977 188 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Xrcc5P27641 732 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Brcc3P46737 291 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Uchl4P58321 233 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Frat1P70339 274 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 FancbQ5XJY6 703 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 SowahaQ8BLS7 548 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 KyQ8C8H8 661 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pak2Q8CIN4 524 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 FcrlaQ920A9 352 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Arfgap2Q99K28 520 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Slamf8Q9D3G2 278 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dennd4aE9Q8V6 1869 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tmem131O70472 1877 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nup210lQ9D2F7 1881 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Zscan4-ps3A0A1B0GRH6 506 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Zscan4-ps2A0A1C7CYU6 506 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gpr25P0C5I1 358 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cyp2b9P12790 491 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nap1l1P28656 391 aaKnown RBP10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MlxipQ2VPU4 917 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm11487Q5RIS0 354 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MmeQ61391 750 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nucks1Q80XU3 234 aaKnown RBP10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cyth4Q80YW0 393 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 EmsyQ8BMB0 1264 aaKnown RBP10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tmprss4Q8VCA5 435 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rbm10Q99KG3 930 aaKnown RBP10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MajinQ9D992 256 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rfx5Q9JL61 658 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tspan3Q9QY33 253 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Spata31d1aE9QA35 1336 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 1700017N19RikA0A087WPJ1 469 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 2210011C24RikA0A087WQ89 206 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Osbpl7A2A716 963 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Vmn2r1O70410 912 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fam167bP17257 162 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tatdn3Q3U1C6 294 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Zfp120Q8BZW4 436 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MtrrQ8C1A3 696 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ftsj1Q8CBC7 324 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rxfp2Q91ZZ5 737 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fuca1Q99LJ1 452 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Capn12Q9ER56 720 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Casp8ap2Q9WUF3 1962 aa10.61□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dnah12Q3V0Q1 3086 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Slc4a11A2AJN7 862 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Myo1aO88329 1043 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rdh7O88451 316 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fcer2P20693 331 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Psmc1P62192 440 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 L1td1Q587J6 782 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 UrgcpQ5NCI0 926 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pacsin1Q61644 441 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms