RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Map3k19E9Q3S4 1311 aa8.5□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Tnrc6cQ3UHC0 1690 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Sbno1Q689Z5 1390 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Kat6bQ8BRB7 1872 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Col16a1Q8BLX7 1580 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Gm10093D3YYI8 482 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Gm10647E9Q8X0 124 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Hdac1O09106 482 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Dscr3O35075 297 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Acvr2bP27040 536 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Alox5P48999 674 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rac3P60764 192 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Mks1Q5SW45 561 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 PapolaQ61183 739 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Entpd3Q8BFW6 529 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Smoc1Q8BLY1 463 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Iqcb1Q8BP00 598 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Cnot4Q8BT14 575 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Slc35g1Q8BY79 368 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Il23rQ8K4B4 644 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rbmx2Q8R0F5 326 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Sirt3Q8R104 334 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 RestQ8VIG1 1082 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ubl7Q91W67 380 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 CtsqQ91ZF4 343 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Lrrc59Q922Q8 307 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ucn3Q924A4 164 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Armc10Q9D0L7 306 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ldb3Q9JKS4 723 aaKnown RBP8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Nfat5Q9WV30 1534 aa8.49□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 NinlQ6ZQ12 1394 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ube2ql1A0PJN4 161 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ankrd63A2ARS0 390 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Grip2G3XA20 1042 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rin3P59729 980 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 NpeppsQ11011 920 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Cacna2d4Q5RJF7 1116 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Wnt8aQ64527 354 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Shkbp1Q6P7W2 704 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Slc9b1Q8C0X2 565 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Plekhh3Q8VCE9 796 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 SmtnQ921U8 923 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Neurl1Q923S6 574 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Acsbg1Q99PU5 721 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Oxct1Q9D0K2 520 aaKnown RBP8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Tor3aQ9ER38 385 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 PhaxQ9JJT9 385 aaKnown RBP8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Irx4Q9QY61 515 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Scn7aB1AYL1 1681 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Znf335A2A5K6 1337 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rpgrip1Q9EPQ2 1331 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Frmpd2A0A140LI67 1392 aa8.48□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Kifc3O35231 824 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Slc2a4P14142 509 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rag1P15919 1040 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ruvbl1P60122 456 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Rab1AP62821 205 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Plbd2Q3TCN2 594 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ralbp1Q62172 648 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Tcp10aQ80W76 438 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Cwf19l2Q8BG79 887 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Cstf2Q8BIQ5 580 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Serpinb9dQ8BMT0 377 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Nxph3Q91VX5 252 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Creb3l3Q91XE9 479 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Trim66Q924W6 1242 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Abcf2Q99LE6 628 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Gtpbp4Q99ME9 634 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Snrpb2Q9CQI7 225 aaKnown RBP8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ephx1Q9D379 455 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Krtap31-1Q9D644 177 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Sfmbt1Q9JMD1 863 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Ubr1O70481 1757 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Map2P20357 1828 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 Cacna1sQ02789 1880 aa8.47□□□□□ -1.05
Ccdc54-201ENSMUST00000062439 1520401A03RikA0A0J9YVH6 598 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 A030005K14RikA0A1Y7VNY1 122 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Usp36B1AQJ2 1098 aaKnown RBP8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gm8126E9Q1N7 198 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Foxd2O35392 492 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 InvsO89019 1062 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Fstl4Q5STE3 841 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 ManeaQ6NXH2 462 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Krt9Q6RHW0 743 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cracr2bQ80ZJ8 394 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Unc119bQ8C4B4 251 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Srgap1Q91Z69 1062 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Trim8Q99PJ2 551 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 ClcnkbQ9WUB6 687 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Arih2Q9Z1K6 492 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cdhr2E9Q7P9 1308 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Col22a1E9Q7P1 1613 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 PaskQ8CEE6 1383 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Nid2O88322 1403 aa8.46□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Prss40A6H6T1 365 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gm5483B2RV77 97 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Myo1eE9Q634 1107 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 4933406M09RikG3XA12 479 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Hyal2O35632 473 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 MyadmO35682 320 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms