RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 MtrrQ8C1A3 696 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ankrd54Q91WK7 299 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcdha3Q91Y16 942 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Katnbl1Q9CWJ3 299 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Wdr64Q9D565 1086 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cnot8Q9D8X5 292 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atp5oQ9DB20 213 aaKnown RBP11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 RpgrQ9R0X5 1001 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pja1O55176 578 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc10a3P21129 473 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ctnna1P26231 906 aaKnown RBP11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rab20P35295 233 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Trmt1Q3TX08 663 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vps41Q5KU39 853 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Acbd5Q5XG73 508 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dusp11Q6NXK5 321 aaKnown RBP11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cul9Q80TT8 1865 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Spata20Q80YT5 790 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tcaf1Q8BNE1 924 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Usp38Q8BW70 1042 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Usp26Q99MX1 835 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Etv6P97360 485 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tespa1Q3U132 458 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nat8lQ3UGX3 299 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 ItgaeQ60677 1167 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atp2a3Q64518 1038 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Olfr389Q7TRX7 312 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nsun6Q7TS68 476 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fermt3Q8K1B8 665 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vmn2r19G5E8G4 854 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 S100a13P97352 98 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fam183bQ5NC57 135 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Creb3Q61817 404 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zswim9Q6DI92 447 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 RbakQ8BQC8 711 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tmem60Q8K174 133 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Usp31E9Q6Y8 1344 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 RnaselQ05921 735 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znf827Q505G8 1078 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Krt31Q61765 416 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Smarca1Q6PGB8 1046 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 DtnaQ9D2N4 746 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 4931423N10RikQ9D4J9 382 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Galk1Q9R0N0 392 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Eif3dO70194 548 aaKnown RBP11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Serpinh1P19324 417 aaKnown RBP11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mmp13P33435 472 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Kcnj5P48545 419 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mrgprb1Q3UG61 350 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dhx58Q99J87 678 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nkx2-4Q9EQM3 354 aa11.19□□□□□ -0.62
Limch1-201ENSMUST00000038188 1700113H08RikE9Q9Q5 327 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ap3d1O54774 1199 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nploc4P60670 608 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nr2e1Q64104 385 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fndc3bQ6NWW9 1207 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Haus4Q8BFT2 363 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znf473Q8BI67 892 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cpa5Q8R4H4 436 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rabep2Q91WG2 554 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Arih1Q9Z1K5 555 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atf2P16951 487 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Kpna2P52293 529 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Defb25Q30KN8 71 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mfhas1Q3V1N1 1048 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tph2Q8CGV2 488 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pop1Q8K205 1045 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcdhgc5Q91XW9 944 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Q9CYI0 393 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mrpl4Q9DCU6 294 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Git2Q9JLQ2 708 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tle2Q9WVB2 767 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Adgra3Q7TT36 1310 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zfp788E9Q980 884 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm5160F8VPN3 147 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 DcxO88809 366 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Hoxa11P31311 313 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zc3h18Q0P678 948 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 MlxipQ2VPU4 917 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rapgefl1Q68EF8 662 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atg9bQ6EBV9 922 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Szrd1Q6NXN1 152 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fnip2Q80TD3 1108 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcdhb7Q8CDY9 829 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tmem132cQ8CEF9 1099 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Kdm4cQ8VCD7 1054 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mob2Q8VI63 235 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Abcg4Q91WA9 646 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Q91WD4 421 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tlr9Q9EQU3 1032 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm43638A0A0J9YU36 694 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ccdc194A0A140LIT1 234 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Lrrc73B2RWC4 316 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm1141B9EJU1 475 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 RabggtbP53612 339 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 YwhaqP68254 245 aaKnown RBP11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Q3KNL4 93 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tmprss11eQ5S248 423 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rnf139Q7TMV1 668 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zbtb33Q8BN78 671 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms