RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Bace1P56818 501 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 SnrpfP62307 86 aaKnown RBP12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Upf3bQ3ULL6 472 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Tom1l2Q5SRX1 507 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Tph2Q8CGV2 488 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Kdm1bQ8CIG3 826 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Cdk9Q99J95 372 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Cables1Q9ESJ1 568 aa12.03□□□□□ -0.48
Vps54-201ENSMUST00000006221 Gm11549A0A286YD83 63 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Ptp4a2O70274 167 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Apba3O88888 571 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 PrkceP16054 737 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Sstr3P30935 428 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Cdca2Q14B71 982 aaKnown RBP12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Tmem145Q8C4U2 746 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Usp11Q99K46 921 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Mical3Q8CJ19 1993 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Zfp839E9PUU5 921 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Rnf216P58283 853 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Vamp7P70280 220 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Ppp1r12cQ3UMT1 782 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Tdpoz4Q6YCH2 370 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Klhl29Q80T74 875 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Rbm12b1Q80YR9 836 aaKnown RBP12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Ivns1abpQ920Q8 642 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Nop56Q9D6Z1 580 aaKnown RBP12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Pdcd7Q9WTY1 482 aa12.02□□□□□ -0.48
Vps54-201ENSMUST00000006221 Spata31d1aE9QA35 1336 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ripor3A1L3T7 938 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 IqccA2ADZ8 418 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Clca3bE9PUL3 1044 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Nrg3O35181 713 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cops2P61202 443 aaKnown RBP12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Trim43bP86448 445 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ppm1jQ149T7 507 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Srebf2Q3U1N2 1130 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Nlrp4eQ66X19 978 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Siglec10Q80ZE3 688 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Rhot1Q8BG51 631 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Osbpl2Q8BX94 484 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Golga1Q9CW79 758 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cst8P32766 142 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Rfx2P48379 717 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Rad54lP70270 747 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ankmy2Q3TPE9 440 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cnga4Q3UW12 575 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Fam81aQ3UXZ6 364 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Sema5bQ60519 1093 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Hook3Q8BUK6 718 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Fbxl5Q8C2S5 690 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ciapin1Q8WTY4 309 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 HlcsQ920N2 722 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Clec4aQ9QZ15 238 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ly6iQ9WU67 134 aa12.02□□□□□ -0.49
Vps54-201ENSMUST00000006221 2210011C24RikA0A087WQ89 206 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ctnnal1O88327 731 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Lmnb1P14733 588 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Slc10a4Q3UEZ8 437 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Trim80Q3V061 624 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Tnpo2Q99LG2 887 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Rabgef1Q9JM13 491 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Apol8A2VDH7 339 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cyp4f40G3UW81 524 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 GckP52792 465 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ripk2P58801 539 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Pou6f1Q07916 301 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Spdye4aQ5IBH6 268 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Tcf12Q61286 706 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 2700097O09RikQ6PGK3 301 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 B3glctQ8BHT6 489 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Trmt13Q8BYH3 481 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Usp37Q8C0R0 979 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cwf19l1Q8CI33 537 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ago2Q8CJG0 860 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 HibchQ8QZS1 385 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ep400Q8CHI8 3072 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 RcvrnP34057 202 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Cpa1Q7TPZ8 419 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ero1aQ8R180 464 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Zfp623Q9CY99 499 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 AuhQ9JLZ3 314 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Pdzd4Q9QY39 772 aa12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 PygmQ9WUB3 842 aaKnown RBP12.01□□□□□ -0.49
Vps54-201ENSMUST00000006221 Speer2E9Q9U2 264 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Klrk1O54709 232 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Bcat1P24288 386 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Rbp3P49194 1234 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Actr2P61161 394 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Apol7cQ8C6E1 369 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Zbtb44Q8R0A2 453 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Usp33Q8R5K2 909 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Slfn8B1ARD8 910 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ttc7bE9Q6P5 843 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Map4k1P70218 827 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ece1Q4PZA2 769 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Stip1Q60864 543 aaKnown RBP12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Ksr1Q61097 873 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Dync1li2Q6PDL0 492 aaKnown RBP12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Mapk15Q80Y86 549 aa12□□□□□ -0.49
Vps54-201ENSMUST00000006221 Tcaf1Q8BNE1 924 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms