RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Haus3Q8QZX2 570 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ube4bQ9ES00 1173 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Neu2Q9JMH3 379 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 GgcxQ9QYC7 757 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Psma4Q9R1P0 261 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Bcl10Q9Z0H7 233 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kdm5aQ3UXZ9 1690 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Zcchc7B1AX39 541 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 P01734 135 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sipa1P46062 1037 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdo1P60334 200 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rbbp7Q60973 425 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ush1gQ80T11 461 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tex13c3Q810P0 219 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sptlc3Q8BG54 563 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 4932414N04RikQ8CEQ9 752 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sept8Q8CHH9 429 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 ThtpaQ8JZL3 224 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mapre2Q8R001 326 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Golph3Q9CRA5 298 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Itga2bQ9QUM0 1033 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Grin2dQ03391 1323 aa9.59□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CrnnD3YUU6 520 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Dsg3O35902 993 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lire1P11260 357 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rab6bP61294 208 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mapk1P63085 358 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmprss11aQ3UQ41 389 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ttbk2Q3UVR3 1243 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cfap52Q5F201 620 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cyfip2Q5SQX6 1253 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Als2clQ60I26 952 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Znf507Q6ZPY5 941 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Eif2s1Q6ZWX6 315 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Recql4Q75NR7 1216 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Peg10Q7TN75 958 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Golph3lQ8R088 285 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Batf3Q9D275 118 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Myo1hQ9D6A1 958 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CtsfQ9R013 462 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Capn7Q9R1S8 813 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Patl2A2ARM1 529 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ap1g2O88512 791 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fgd3O88842 733 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rrm1P07742 792 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gnat1P20612 350 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ddit3P35639 168 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mmp14P53690 582 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Oca2Q62052 833 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TfrcQ62351 763 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mapk4Q6P5G0 583 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 WhrnQ80VW5 918 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Susd4Q8BH32 490 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 PolrmtQ8BKF1 1207 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Prkaa2Q8BRK8 552 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cwf19l1Q8CI33 537 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Magi2Q9WVQ1 1275 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mapk13Q9Z1B7 366 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Atp7bQ64446 1462 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Clrn2B2RVW2 232 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cyp4f40G3UW81 524 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 AlbP07724 608 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TpbpaP13438 124 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sash1P59808 1230 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Foxn3Q499D0 457 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sh3gl2Q62420 352 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hist2h2acQ64523 129 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cyp4x1Q6A152 507 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hist2h2aa1Q6GSS7 130 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm5414Q6IFZ8 552 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ano5Q75UR0 904 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Catsper3Q80W99 395 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mrps26Q80ZS3 200 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Trim14Q8BVW3 440 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Prdm8Q8BZ97 687 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CbsQ91WT9 561 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Psmd12Q9D8W5 456 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mettl7bQ9DD20 244 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Map3k20Q9ESL4 802 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NfkbizQ9EST8 728 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ap4b1Q9WV76 738 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nme3Q9WV85 169 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mbd5B1AYB6 1498 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm3173A6NAS3 172 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm3020E9Q3J7 150 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm2897K7N6T7 172 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm3264L7N2C5 238 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lnx1O70263 728 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zfy2P20662 777 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TfamP40630 243 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rbp3P49194 1234 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CartptP56388 129 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Col6a1Q04857 1025 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmem26Q3UP23 366 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nr2c1Q505F1 590 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Thrap3Q569Z6 951 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Vil1Q62468 827 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lrig3Q6P1C6 1117 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cyfip1Q7TMB8 1253 aa9.58□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rccd1Q8BTU7 377 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms