RNA–Protein interactions for RNA: snR189

snR189, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR189, Length 189 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR189snR189 EGD1Q02642 157 aaKnown RBP0.52□□□□□ -2.33
snR189snR189 HAM1P47119 197 aaKnown RBP0.51□□□□□ -2.33
snR189snR189 VPS21P36017 210 aaKnown RBP0.5□□□□□ -2.33
snR189snR189 USE1P53146 245 aa0.5□□□□□ -2.33
snR189snR189 SAY1P53324 424 aa0.5□□□□□ -2.33
snR189snR189 RHO3Q00245 231 aaKnown RBP0.5□□□□□ -2.33
snR189snR189 TRM12Q04235 462 aa0.5□□□□□ -2.33
snR189snR189 COX20Q04935 205 aa0.5□□□□□ -2.33
snR189snR189 ERD2P18414 219 aa0.49□□□□□ -2.33
snR189snR189 DAL82P21705 255 aa0.49□□□□□ -2.33
snR189snR189 AIF1P52923 378 aa0.49□□□□□ -2.33
snR189snR189 ADH6Q04894 360 aaKnown RBP0.49□□□□□ -2.33
snR189snR189 PBN1P25580 416 aa0.48□□□□□ -2.33
snR189snR189 TVP38P36164 337 aa0.48□□□□□ -2.33
snR189snR189 YHR127WP38833 243 aaKnown RBP0.48□□□□□ -2.33
snR189snR189 YNR077CP53758 84 aa0.48□□□□□ -2.33
snR189snR189 SSQ1Q05931 657 aaPredicted RBP0.48□□□□□ -2.33
snR189snR189 YPL229WQ99395 206 aa0.48□□□□□ -2.33
snR189snR189 SRY1P36007 326 aa0.47□□□□□ -2.33
snR189snR189 MSH5Q12175 901 aa0.47□□□□□ -2.33
snR189snR189 PSF1Q12488 208 aa0.47□□□□□ -2.33
snR189snR189 PDR18P53756 1333 aa0.46□□□□□ -2.34
snR189snR189 YHR139C-AO13536 103 aa0.46□□□□□ -2.34
snR189snR189 SOK1P40317 901 aa0.46□□□□□ -2.34
snR189snR189 ERJ5P43613 295 aaPredicted RBP0.46□□□□□ -2.34
snR189snR189 MPP6P53725 186 aaPredicted RBP0.46□□□□□ -2.34
snR189snR189 YML096WQ04489 525 aa0.46□□□□□ -2.34
snR189snR189 SEI1Q06058 285 aa0.46□□□□□ -2.34
snR189snR189 RPL24AP04449 155 aaKnown RBP0.45□□□□□ -2.34
snR189snR189 POL30P15873 258 aaKnown RBP0.45□□□□□ -2.34
snR189snR189 DAL80P26343 269 aa0.45□□□□□ -2.34
snR189snR189 BFR1P38934 470 aaKnown RBP RIP-Chip data0.45□□□□□ -2.34not detected
snR189snR189 RSM25P40496 264 aa0.45□□□□□ -2.34
snR189snR189 EMC2P47133 292 aaKnown RBP0.45□□□□□ -2.34
snR189snR189 ILM1P47155 203 aa0.45□□□□□ -2.34
snR189snR189 YAR1P46683 200 aa0.44□□□□□ -2.34
snR189snR189 DOC1P53068 250 aa0.44□□□□□ -2.34
snR189snR189 YDL180WQ12301 547 aa0.44□□□□□ -2.34
snR189snR189 SNU23Q12368 194 aaPredicted RBP0.44□□□□□ -2.34
snR189snR189 YPR170W-BP0C5R9 85 aa0.43□□□□□ -2.34
snR189snR189 RNA15P25299 296 aaPredicted RBP0.43□□□□□ -2.34
snR189snR189 YET1P35723 206 aa0.43□□□□□ -2.34
snR189snR189 MEP1P40260 492 aa0.43□□□□□ -2.34
snR189snR189 POP3P53833 195 aaPredicted RBP0.42□□□□□ -2.34
snR189snR189 MRPS28P21771 286 aa0.41□□□□□ -2.34
snR189snR189 TFC1P32367 649 aa0.41□□□□□ -2.34
snR189snR189 RIB1P38066 345 aa0.41□□□□□ -2.34
snR189snR189 BIG1P38813 335 aa0.41□□□□□ -2.34
snR189snR189 NOP13P53883 403 aaKnown RBP RIP-Chip data0.41□□□□□ -2.34not detected
snR189snR189 YHR212W-AP0CX91 67 aa0.4□□□□□ -2.35
snR189snR189 YMR144WP40214 342 aaKnown RBP0.4□□□□□ -2.35
snR189snR189 CUS2P53830 285 aaPredicted RBP0.4□□□□□ -2.35
snR189snR189 ABF2Q02486 183 aa0.4□□□□□ -2.35
snR189snR189 MRPL37P36532 105 aa0.39□□□□□ -2.35
snR189snR189 GAS3Q03655 524 aa0.39□□□□□ -2.35
snR189snR189 SLH1P53327 1967 aaKnown RBP0.38□□□□□ -2.35
snR189snR189 REP2P03872 296 aa0.38□□□□□ -2.35
snR189snR189 KNH1P50112 268 aa0.38□□□□□ -2.35
snR189snR189 YNL010WP53981 241 aaKnown RBP0.38□□□□□ -2.35
snR189snR189 SDO1Q07953 250 aaKnown RBP0.38□□□□□ -2.35
snR189snR189 YLR126CQ12288 251 aa0.38□□□□□ -2.35
snR189snR189 ERV25P54837 211 aaKnown RBP0.37□□□□□ -2.35
snR189snR189 TUS1Q06412 1307 aa0.37□□□□□ -2.35
snR189snR189 URA8P38627 578 aaPredicted RBP0.36□□□□□ -2.35
snR189snR189 YMD8Q03697 442 aa0.36□□□□□ -2.35
snR189snR189 CSM4Q08955 156 aa0.36□□□□□ -2.35
snR189snR189 YKL075CP36083 450 aa0.35□□□□□ -2.35
snR189snR189 UMP1P38293 148 aa0.35□□□□□ -2.35
snR189snR189 IRC22P40006 225 aa0.35□□□□□ -2.35
snR189snR189 BTS1Q12051 335 aa0.35□□□□□ -2.35
snR189snR189 YFL065CP43539 102 aa0.34□□□□□ -2.36
snR189snR189 SNZ1Q03148 297 aa0.34□□□□□ -2.36
snR189snR189 YBR209WP38311 105 aa0.33□□□□□ -2.36
snR189snR189 SIP3P38717 1229 aa0.33□□□□□ -2.36
snR189snR189 PET100P38958 111 aa0.33□□□□□ -2.36
snR189snR189 EAF6P47128 113 aa0.33□□□□□ -2.36
snR189snR189 YLR156WP0CE96 114 aa0.32□□□□□ -2.36
snR189snR189 YLR159WP0CE97 114 aa0.32□□□□□ -2.36
snR189snR189 YLR161WP0CE98 114 aa0.32□□□□□ -2.36
snR189snR189 YAE1P47118 141 aaPredicted RBP0.32□□□□□ -2.36
snR189snR189 ARO8P53090 500 aaKnown RBP0.32□□□□□ -2.36
snR189snR189 SIR2P06700 562 aa0.31□□□□□ -2.36
snR189snR189 TCP1P12612 559 aaKnown RBP0.31□□□□□ -2.36
snR189snR189 ATG22P25568 528 aa0.31□□□□□ -2.36
snR189snR189 EDC3P39998 551 aaKnown RBP0.31□□□□□ -2.36
snR189snR189 PEX17P40155 199 aa0.31□□□□□ -2.36
snR189snR189 RCE1Q03530 315 aa0.31□□□□□ -2.36
snR189snR189 LPP1Q04396 274 aa0.31□□□□□ -2.36
snR189snR189 MRPL17P36528 281 aa0.3□□□□□ -2.36
snR189snR189 FLX1P40464 311 aa0.3□□□□□ -2.36
snR189snR189 YOR029WQ12243 111 aa0.3□□□□□ -2.36
snR189snR189 MSF1P08425 469 aa0.29□□□□□ -2.36
snR189snR189 SNC2P33328 115 aa0.29□□□□□ -2.36
snR189snR189 YDR248CQ03786 193 aa0.29□□□□□ -2.36
snR189snR189 FSF1Q12029 327 aaKnown RBP0.29□□□□□ -2.36
snR189snR189 DOG2P38773 246 aa0.28□□□□□ -2.36
snR189snR189 SWP1Q02795 286 aa0.28□□□□□ -2.36
snR189snR189 ACC1Q00955 2233 aaKnown RBP0.28□□□□□ -2.37
snR189snR189 SRB4P32569 687 aa0.27□□□□□ -2.37
snR189snR189 MRPL28P36527 147 aa0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms