RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W NRK1P53915 240 aa1.34□□□□□ -2.2
SKI3YPR189W YML018CQ03730 393 aa1.34□□□□□ -2.2
SKI3YPR189W SEI1Q06058 285 aa1.34□□□□□ -2.2
SKI3YPR189W YPR147CQ06522 304 aaKnown RBP1.34□□□□□ -2.2
SKI3YPR189W IRC23Q08416 157 aa1.34□□□□□ -2.2
SKI3YPR189W GEP5Q12393 293 aa1.34□□□□□ -2.2
SKI3YPR189W BGL2P15703 313 aaKnown RBP1.34□□□□□ -2.2
SKI3YPR189W ISY1P21374 235 aaPredicted RBP1.34□□□□□ -2.2
SKI3YPR189W CAM1P29547 415 aaKnown RBP1.34□□□□□ -2.2
SKI3YPR189W YKR041WP36134 250 aa1.34□□□□□ -2.2
SKI3YPR189W ECM13P38195 257 aa1.34□□□□□ -2.2
SKI3YPR189W MDM31P38880 579 aa1.34□□□□□ -2.2
SKI3YPR189W SEO1P39709 593 aa1.34□□□□□ -2.2
SKI3YPR189W SPO73P40031 143 aa1.34□□□□□ -2.2
SKI3YPR189W YMR144WP40214 342 aaKnown RBP1.34□□□□□ -2.2
SKI3YPR189W BRR6P53062 197 aa1.34□□□□□ -2.2
SKI3YPR189W PDR17P53844 350 aa1.34□□□□□ -2.2
SKI3YPR189W FYV6P53913 173 aa1.34□□□□□ -2.2
SKI3YPR189W SDC1Q03323 175 aa1.34□□□□□ -2.2
SKI3YPR189W MZM1Q03429 123 aaPredicted RBP1.34□□□□□ -2.2
SKI3YPR189W NNT1Q05874 261 aa1.34□□□□□ -2.2
SKI3YPR189W ATP16Q12165 160 aa1.34□□□□□ -2.2
SKI3YPR189W DBF2P22204 572 aa1.33□□□□□ -2.2
SKI3YPR189W BMH1P29311 267 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W MRPL3P36516 390 aa1.33□□□□□ -2.2
SKI3YPR189W MED8P38304 223 aa1.33□□□□□ -2.2
SKI3YPR189W YHL049CP38722 271 aa1.33□□□□□ -2.2
SKI3YPR189W YHR127WP38833 243 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YFH7P43591 353 aa1.33□□□□□ -2.2
SKI3YPR189W YJL016WP47072 561 aa1.33□□□□□ -2.2
SKI3YPR189W CPR7P47103 393 aa1.33□□□□□ -2.2
SKI3YPR189W YGL235WP53071 178 aa1.33□□□□□ -2.2
SKI3YPR189W YNR066CP53752 436 aa1.33□□□□□ -2.2
SKI3YPR189W CWC25P53854 179 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W TPS1Q00764 495 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YDR115WQ04598 105 aa1.33□□□□□ -2.2
SKI3YPR189W INM2Q05533 292 aa1.33□□□□□ -2.2
SKI3YPR189W NOC4Q06512 552 aaPredicted RBP1.33□□□□□ -2.2
SKI3YPR189W MRX4Q12467 430 aa1.33□□□□□ -2.2
SKI3YPR189W LSO2Q3E772 92 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W PET20Q99373 253 aa1.33□□□□□ -2.2
SKI3YPR189W ACC1Q00955 2233 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W RPL15AP05748 204 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YKR104WP0CE69 306 aa1.33□□□□□ -2.2
SKI3YPR189W RPS24AP0CX31 135 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W RPS24BP0CX32 135 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W ZWF1P11412 505 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YCR043CP25361 127 aa1.33□□□□□ -2.2
SKI3YPR189W IMP1P28627 190 aa1.33□□□□□ -2.2
SKI3YPR189W SRP102P36057 244 aaPredicted RBP1.33□□□□□ -2.2
SKI3YPR189W CAF4P36130 643 aa1.33□□□□□ -2.2
SKI3YPR189W MRPL28P36527 147 aa1.33□□□□□ -2.2
SKI3YPR189W MRPL39P36533 70 aa1.33□□□□□ -2.2
SKI3YPR189W HEK2P38199 381 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2 RIP-Chip
SKI3YPR189W POP7P38291 140 aa1.33□□□□□ -2.2
SKI3YPR189W DER1P38307 211 aa1.33□□□□□ -2.2
SKI3YPR189W SEN34P39707 275 aa1.33□□□□□ -2.2
SKI3YPR189W PAN6P40459 309 aa1.33□□□□□ -2.2
SKI3YPR189W EGT2P42835 1041 aa1.33□□□□□ -2.2
SKI3YPR189W STB1P42845 420 aa1.33□□□□□ -2.2
SKI3YPR189W YJR085CP47131 105 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W CRH1P53301 507 aa1.33□□□□□ -2.2
SKI3YPR189W YMR279CQ03263 540 aa1.33□□□□□ -2.2
SKI3YPR189W ARO80Q04052 950 aa1.33□□□□□ -2.2
SKI3YPR189W DXO1Q06349 442 aa1.33□□□□□ -2.2
SKI3YPR189W RRP40Q08285 240 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YOR292CQ08743 309 aa1.33□□□□□ -2.2
SKI3YPR189W IZH2Q12442 317 aa1.33□□□□□ -2.2
SKI3YPR189W AGC1Q12482 902 aa1.33□□□□□ -2.2
SKI3YPR189W RPL21BQ12672 160 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YGR035W-AQ45U48 73 aa1.33□□□□□ -2.2
SKI3YPR189W STF2P16965 84 aa1.33□□□□□ -2.2
SKI3YPR189W GRX2P17695 143 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W YCR025CP25352 136 aa1.33□□□□□ -2.2
SKI3YPR189W OXA1P39952 402 aa1.33□□□□□ -2.2
SKI3YPR189W ORM1P53224 222 aa1.33□□□□□ -2.2
SKI3YPR189W SPG4Q04438 115 aa1.33□□□□□ -2.2
SKI3YPR189W YPL245WQ12179 454 aaKnown RBP1.33□□□□□ -2.2
SKI3YPR189W UTP20P35194 2493 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W COX5AP00424 153 aa1.32□□□□□ -2.2
SKI3YPR189W SRL3P36167 246 aa1.32□□□□□ -2.2
SKI3YPR189W YIL152WP40455 235 aa1.32□□□□□ -2.2
SKI3YPR189W YJR056CP47115 236 aa1.32□□□□□ -2.2
SKI3YPR189W YMR315WQ04869 349 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W ERP1Q05359 219 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W PBA1Q05778 276 aa1.32□□□□□ -2.2
SKI3YPR189W YNL162W-AQ3E7A8 72 aa1.32□□□□□ -2.2
SKI3YPR189W DPM1P14020 267 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W SDH3P33421 198 aa1.32□□□□□ -2.2
SKI3YPR189W NUF2P33895 451 aa1.32□□□□□ -2.2
SKI3YPR189W ECM33P38248 429 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W NQM1P53228 333 aaPredicted RBP1.32□□□□□ -2.2
SKI3YPR189W PET191Q02772 108 aa1.32□□□□□ -2.2
SKI3YPR189W ADD37Q03233 198 aa1.32□□□□□ -2.2
SKI3YPR189W NDD1Q08887 554 aa1.32□□□□□ -2.2
SKI3YPR189W NSL1Q12143 216 aa1.32□□□□□ -2.2
SKI3YPR189W MSB2P32334 1306 aa1.32□□□□□ -2.2
SKI3YPR189W CDC28P00546 298 aaKnown RBP1.32□□□□□ -2.2
SKI3YPR189W CUP2P15315 225 aa1.32□□□□□ -2.2
SKI3YPR189W UBC8P28263 218 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms