RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W GLR1P41921 483 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W YAR1P46683 200 aa1.97□□□□□ -2.09
SEC16YPL085W BUL1P48524 976 aa1.97□□□□□ -2.09
SEC16YPL085W MSE1P48525 536 aa1.97□□□□□ -2.09
SEC16YPL085W HNT2P49775 206 aa1.97□□□□□ -2.09
SEC16YPL085W SPR6Q01684 191 aa1.97□□□□□ -2.09
SEC16YPL085W LPP1Q04396 274 aa1.97□□□□□ -2.09
SEC16YPL085W GLO2Q05584 274 aa1.97□□□□□ -2.09
SEC16YPL085W YCT1Q12235 531 aa1.97□□□□□ -2.09
SEC16YPL085W HTZ1Q12692 134 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W Q0144Q9ZZW2 109 aa1.97□□□□□ -2.09
SEC16YPL085W BOS1P25385 244 aa1.97□□□□□ -2.09
SEC16YPL085W PEX4P29340 183 aa1.97□□□□□ -2.09
SEC16YPL085W SRB6P32570 121 aa1.97□□□□□ -2.09
SEC16YPL085W ZRT1P32804 376 aa1.97□□□□□ -2.09
SEC16YPL085W YHC3P47040 408 aa1.97□□□□□ -2.09
SEC16YPL085W SMM1P53720 384 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W PGA1P53896 198 aa1.97□□□□□ -2.09
SEC16YPL085W TIM44Q01852 431 aa1.97□□□□□ -2.09
SEC16YPL085W MRX11Q03079 207 aa1.97□□□□□ -2.09
SEC16YPL085W HUA2Q12134 243 aa1.97□□□□□ -2.09
SEC16YPL085W TY1A-NL1Q12391 440 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W ERG27Q12452 347 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W RPN13O13563 156 aa1.97□□□□□ -2.09
SEC16YPL085W CYC1P00044 109 aaPredicted RBP1.97□□□□□ -2.09
SEC16YPL085W RPS14AP06367 137 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W NHP6AP11632 93 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W RHB1P25378 209 aa1.97□□□□□ -2.09
SEC16YPL085W RPS14BP39516 138 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W MPM1P40364 252 aa1.97□□□□□ -2.09
SEC16YPL085W YJL163CP46996 555 aa1.97□□□□□ -2.09
SEC16YPL085W DAL4Q04895 635 aa1.97□□□□□ -2.09
SEC16YPL085W MRL1Q06815 381 aa1.97□□□□□ -2.09
SEC16YPL085W YPR064WQ12492 139 aa1.97□□□□□ -2.09
SEC16YPL085W YMR030W-AQ3E760 96 aa1.97□□□□□ -2.09
SEC16YPL085W TAD3Q9URQ3 322 aa1.97□□□□□ -2.09
SEC16YPL085W YEL009C-AA0A023PZF2 135 aa1.97□□□□□ -2.09
SEC16YPL085W RPS22AP0C0W1 130 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W BAR1P12630 587 aa1.97□□□□□ -2.09
SEC16YPL085W SEC22P22214 214 aa1.97□□□□□ -2.09
SEC16YPL085W SAN1P22470 610 aa1.97□□□□□ -2.09
SEC16YPL085W ALK2P32789 676 aaPredicted RBP1.97□□□□□ -2.09
SEC16YPL085W PMU1P36069 295 aa1.97□□□□□ -2.09
SEC16YPL085W MRPL36P36531 177 aa1.97□□□□□ -2.09
SEC16YPL085W BDH1P39714 382 aa1.97□□□□□ -2.09
SEC16YPL085W COX15P40086 486 aa1.97□□□□□ -2.09
SEC16YPL085W YNL194CP40169 301 aa1.97□□□□□ -2.09
SEC16YPL085W HIT1P46973 164 aa1.97□□□□□ -2.09
SEC16YPL085W YJR096WP47137 282 aa1.97□□□□□ -2.09
SEC16YPL085W BNA7Q04066 261 aa1.97□□□□□ -2.09
SEC16YPL085W MRX8Q05473 314 aa1.97□□□□□ -2.09
SEC16YPL085W IZH3Q07959 543 aa1.97□□□□□ -2.09
SEC16YPL085W YPR022CQ12139 1133 aa1.97□□□□□ -2.09
SEC16YPL085W YDL180WQ12301 547 aa1.97□□□□□ -2.09
SEC16YPL085W YPR145C-AQ2V2P0 78 aa1.97□□□□□ -2.09
SEC16YPL085W FAS2P19097 1887 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W ADK1P07170 222 aaKnown RBP1.96□□□□□ -2.09
SEC16YPL085W SNF5P18480 905 aa1.96□□□□□ -2.09
SEC16YPL085W MIR1P23641 311 aaKnown RBP1.96□□□□□ -2.09
SEC16YPL085W GSH1P32477 678 aa1.96□□□□□ -2.09
SEC16YPL085W YJR012CP47087 207 aa1.96□□□□□ -2.09
SEC16YPL085W CRH1P53301 507 aa1.96□□□□□ -2.09
SEC16YPL085W PKR1Q03880 122 aaKnown RBP1.96□□□□□ -2.09
SEC16YPL085W CTS2Q06350 511 aa1.96□□□□□ -2.09
SEC16YPL085W MRPL35Q06678 367 aa1.96□□□□□ -2.09
SEC16YPL085W FSF1Q12029 327 aaKnown RBP1.96□□□□□ -2.09
SEC16YPL085W FCY22Q12119 530 aa1.96□□□□□ -2.09
SEC16YPL085W ARF1P11076 181 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W GPI18P38211 433 aa1.96□□□□□ -2.1
SEC16YPL085W LSM8P47093 109 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W TTI2P47168 421 aa1.96□□□□□ -2.1
SEC16YPL085W YGL262WP53054 175 aa1.96□□□□□ -2.1
SEC16YPL085W FMP41P53889 259 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W CTL1Q03220 320 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W YMR090WQ04304 227 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W YPR174CQ06616 221 aaPredicted RBP1.96□□□□□ -2.1
SEC16YPL085W YOR378WQ08902 515 aa1.96□□□□□ -2.1
SEC16YPL085W TOR2P32600 2474 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W CYT1P07143 309 aa1.96□□□□□ -2.1
SEC16YPL085W TIR1P10863 254 aa1.96□□□□□ -2.1
SEC16YPL085W ERS1P17261 260 aa1.96□□□□□ -2.1
SEC16YPL085W ARF2P19146 181 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W IES6P32617 166 aa1.96□□□□□ -2.1
SEC16YPL085W REC114P32841 428 aa1.96□□□□□ -2.1
SEC16YPL085W UPS2P35200 230 aa1.96□□□□□ -2.1
SEC16YPL085W NIT2P47016 307 aa1.96□□□□□ -2.1
SEC16YPL085W TYW3P53177 273 aa1.96□□□□□ -2.1
SEC16YPL085W COG7P53195 279 aa1.96□□□□□ -2.1
SEC16YPL085W DUG3P53871 357 aa1.96□□□□□ -2.1
SEC16YPL085W OSW1Q08692 278 aa1.96□□□□□ -2.1
SEC16YPL085W LSO2Q3E772 92 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W ADH3P07246 375 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W HAP3P13434 144 aa1.96□□□□□ -2.1
SEC16YPL085W CWP1P28319 239 aa1.96□□□□□ -2.1
SEC16YPL085W MKS1P34072 584 aa1.96□□□□□ -2.1
SEC16YPL085W SWD3P38123 315 aa1.96□□□□□ -2.1
SEC16YPL085W MTC4P38335 694 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W YIL108WP40483 696 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W VPS73P53142 486 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W SLX9P53251 210 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms