RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C TY1B-DR4Q07793 1604 aa3.15□□□□□ -1.91
NFI1YOR156C CDC36P06100 191 aaPredicted RBP3.15□□□□□ -1.91
NFI1YOR156C FIS1P40515 155 aa3.15□□□□□ -1.91
NFI1YOR156C MGA1P53050 456 aa3.15□□□□□ -1.91
NFI1YOR156C YOR020W-AQ3E824 90 aa3.15□□□□□ -1.91
NFI1YOR156C TCB3Q03640 1545 aaKnown RBP3.15□□□□□ -1.91
NFI1YOR156C YDR157WA0A023PZE8 133 aa3.14□□□□□ -1.91
NFI1YOR156C NUP57P48837 541 aa3.14□□□□□ -1.91
NFI1YOR156C TAF14P35189 244 aa3.14□□□□□ -1.91
NFI1YOR156C YJR056CP47115 236 aa3.14□□□□□ -1.91
NFI1YOR156C DSK2P48510 373 aa3.14□□□□□ -1.91
NFI1YOR156C DID2P69771 204 aa3.14□□□□□ -1.91
NFI1YOR156C ABF2Q02486 183 aa3.14□□□□□ -1.91
NFI1YOR156C YMR279CQ03263 540 aa3.14□□□□□ -1.91
NFI1YOR156C ATG39Q06159 398 aa3.14□□□□□ -1.91
NFI1YOR156C ADF1Q2V2Q1 113 aa3.14□□□□□ -1.91
NFI1YOR156C JIP3O13555 125 aa3.13□□□□□ -1.91
NFI1YOR156C PRX1P34227 261 aaKnown RBP3.13□□□□□ -1.91
NFI1YOR156C ECM33P38248 429 aaKnown RBP3.13□□□□□ -1.91
NFI1YOR156C SNX4P47057 423 aa3.13□□□□□ -1.91
NFI1YOR156C ADO1P47143 340 aaKnown RBP3.13□□□□□ -1.91
NFI1YOR156C AKR2Q12013 749 aa3.13□□□□□ -1.91
NFI1YOR156C RPL28P02406 149 aaKnown RBP3.12□□□□□ -1.91
NFI1YOR156C BNA7Q04066 261 aa3.12□□□□□ -1.91
NFI1YOR156C JLP1Q12358 412 aa3.12□□□□□ -1.91
NFI1YOR156C CDC28P00546 298 aaKnown RBP3.12□□□□□ -1.91
NFI1YOR156C IRC22P40006 225 aa3.12□□□□□ -1.91
NFI1YOR156C YBR063CP38083 404 aa3.11□□□□□ -1.91
NFI1YOR156C YGR026WP53217 278 aa3.11□□□□□ -1.91
NFI1YOR156C IGO1P53897 168 aa3.11□□□□□ -1.91
NFI1YOR156C FCY2P17064 533 aa3.11□□□□□ -1.91
NFI1YOR156C DBF2P22204 572 aa3.11□□□□□ -1.91
NFI1YOR156C ADH3P07246 375 aaKnown RBP3.1□□□□□ -1.91
NFI1YOR156C GRX2P17695 143 aaKnown RBP3.1□□□□□ -1.91
NFI1YOR156C SIP3P38717 1229 aa3.1□□□□□ -1.91
NFI1YOR156C IRC18P47056 224 aa3.1□□□□□ -1.91
NFI1YOR156C RGM1Q00453 211 aa3.1□□□□□ -1.91
NFI1YOR156C SSQ1Q05931 657 aaPredicted RBP3.1□□□□□ -1.91
NFI1YOR156C CDD1Q06549 142 aa3.1□□□□□ -1.91
NFI1YOR156C CHD1P32657 1468 aa3.1□□□□□ -1.91
NFI1YOR156C BXI1P48558 297 aa3.1□□□□□ -1.91
NFI1YOR156C YML108WQ03759 105 aa3.1□□□□□ -1.91
NFI1YOR156C YDR248CQ03786 193 aa3.1□□□□□ -1.91
NFI1YOR156C YAR068WP39564 161 aa3.09□□□□□ -1.91
NFI1YOR156C RPL9AP05738 191 aaKnown RBP3.08□□□□□ -1.92
NFI1YOR156C OAC1P32332 324 aa3.08□□□□□ -1.92
NFI1YOR156C RPL9BP51401 191 aaKnown RBP3.08□□□□□ -1.92
NFI1YOR156C CUS2P53830 285 aaPredicted RBP3.08□□□□□ -1.92
NFI1YOR156C CGI121Q03705 181 aaKnown RBP3.08□□□□□ -1.92
NFI1YOR156C EMC6Q12431 108 aa3.08□□□□□ -1.92
NFI1YOR156C LSO2Q3E772 92 aaKnown RBP3.08□□□□□ -1.92
NFI1YOR156C HSL1P34244 1518 aa3.08□□□□□ -1.92
NFI1YOR156C VMA11P32842 164 aa3.08□□□□□ -1.92
NFI1YOR156C DOG2P38773 246 aa3.07□□□□□ -1.92
NFI1YOR156C DOG1P38774 246 aa3.07□□□□□ -1.92
NFI1YOR156C IKI1P38874 309 aa3.07□□□□□ -1.92
NFI1YOR156C RSM25P40496 264 aa3.07□□□□□ -1.92
NFI1YOR156C DRS2P39524 1355 aa3.07□□□□□ -1.92
NFI1YOR156C SNF6P18888 332 aa3.07□□□□□ -1.92
NFI1YOR156C RFA3P26755 122 aaKnown RBP3.07□□□□□ -1.92
NFI1YOR156C FAR7P43592 221 aa3.07□□□□□ -1.92
NFI1YOR156C PRM8P53174 237 aa3.07□□□□□ -1.92
NFI1YOR156C PDR17P53844 350 aa3.07□□□□□ -1.92
NFI1YOR156C LPP1Q04396 274 aa3.07□□□□□ -1.92
NFI1YOR156C ARR2Q06597 130 aa3.07□□□□□ -1.92
NFI1YOR156C MHT1Q12525 324 aa3.07□□□□□ -1.92
NFI1YOR156C YOR062CP36025 268 aa3.06□□□□□ -1.92
NFI1YOR156C GRE3P38715 327 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
NFI1YOR156C YNL010WP53981 241 aaKnown RBP3.06□□□□□ -1.92
NFI1YOR156C TUS1Q06412 1307 aa3.06□□□□□ -1.92
NFI1YOR156C APS1P35181 156 aa3.05□□□□□ -1.92
NFI1YOR156C MRPS17Q03246 237 aaPredicted RBP3.05□□□□□ -1.92
NFI1YOR156C YMD8Q03697 442 aa3.05□□□□□ -1.92
NFI1YOR156C XRN1P22147 1528 aaKnown RBP3.05□□□□□ -1.92
NFI1YOR156C MMS22Q06164 1454 aa3.05□□□□□ -1.92
NFI1YOR156C FKS1P38631 1876 aaKnown RBP3.05□□□□□ -1.92
NFI1YOR156C CGR1P53188 120 aa3.05□□□□□ -1.92
NFI1YOR156C PSF1Q12488 208 aa3.05□□□□□ -1.92
NFI1YOR156C SIN3P22579 1536 aa3.04□□□□□ -1.92
NFI1YOR156C YPR170W-BP0C5R9 85 aa3.04□□□□□ -1.92
NFI1YOR156C IDH1P28834 360 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
NFI1YOR156C MNN5P46982 586 aa3.04□□□□□ -1.92
NFI1YOR156C YCL012CQ8J0M4 134 aa3.04□□□□□ -1.92
NFI1YOR156C THO2P53552 1597 aaKnown RBP3.04□□□□□ -1.92
NFI1YOR156C SPT6P23615 1451 aaKnown RBP3.04□□□□□ -1.92
NFI1YOR156C SEC4P07560 215 aaKnown RBP3.04□□□□□ -1.92
NFI1YOR156C PUT1P09368 476 aa3.04□□□□□ -1.92
NFI1YOR156C TCA17P32613 152 aa3.04□□□□□ -1.92
NFI1YOR156C DAN1P47178 298 aa3.04□□□□□ -1.92
NFI1YOR156C YMR226CQ05016 267 aaKnown RBP3.04□□□□□ -1.92
NFI1YOR156C HIR3P47171 1648 aa3.04□□□□□ -1.92
NFI1YOR156C REP2P03872 296 aa3.03□□□□□ -1.92
NFI1YOR156C GCN3P14741 305 aa3.03□□□□□ -1.92
NFI1YOR156C RFC4P40339 323 aaKnown RBP3.03□□□□□ -1.92
NFI1YOR156C PET191Q02772 108 aa3.03□□□□□ -1.92
NFI1YOR156C TRM12Q04235 462 aa3.03□□□□□ -1.92
NFI1YOR156C GET4Q12125 312 aa3.03□□□□□ -1.92
NFI1YOR156C YRA1Q12159 226 aaKnown RBP3.03□□□□□ -1.92
NFI1YOR156C HTB1P02293 131 aaKnown RBP3.02□□□□□ -1.93
NFI1YOR156C HTB2P02294 131 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms