RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YMR030W-AQ3E760 96 aa2.53□□□□□ -2
YSF3YNL138W-A YCL012CQ8J0M4 134 aa2.53□□□□□ -2
YSF3YNL138W-A YOL085CQ99345 113 aa2.53□□□□□ -2
YSF3YNL138W-A RPL18AP0CX49 186 aaKnown RBP2.52□□□□□ -2.01
YSF3YNL138W-A RPL18BP0CX50 186 aaKnown RBP2.52□□□□□ -2.01
YSF3YNL138W-A PHO13P19881 312 aa2.52□□□□□ -2.01
YSF3YNL138W-A VMA5P31412 392 aaKnown RBP2.52□□□□□ -2.01
YSF3YNL138W-A YHR122WP38829 231 aa2.52□□□□□ -2.01
YSF3YNL138W-A YCH1P42937 148 aa2.52□□□□□ -2.01
YSF3YNL138W-A LOH1P47055 219 aa2.52□□□□□ -2.01
YSF3YNL138W-A YPT32P51996 222 aaKnown RBP2.52□□□□□ -2.01
YSF3YNL138W-A CGR1P53188 120 aa2.52□□□□□ -2.01
YSF3YNL138W-A SWP1Q02795 286 aa2.52□□□□□ -2.01
YSF3YNL138W-A YPL077CQ02831 240 aa2.52□□□□□ -2.01
YSF3YNL138W-A SPO19Q03029 223 aa2.52□□□□□ -2.01
YSF3YNL138W-A MET31Q03081 177 aa2.52□□□□□ -2.01
YSF3YNL138W-A YMR279CQ03263 540 aa2.52□□□□□ -2.01
YSF3YNL138W-A ARV1Q06541 321 aa2.52□□□□□ -2.01
YSF3YNL138W-A YOL029CQ08187 201 aa2.52□□□□□ -2.01
YSF3YNL138W-A DAS2Q12084 232 aa2.52□□□□□ -2.01
YSF3YNL138W-A MRPL23Q12487 163 aaPredicted RBP2.52□□□□□ -2.01
YSF3YNL138W-A TDH1P00360 332 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A RAS2P01120 322 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A RPL24AP04449 155 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A RPS23AP0CX29 145 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A RPS23BP0CX30 145 aa2.51□□□□□ -2.01
YSF3YNL138W-A YPS1P32329 569 aa2.51□□□□□ -2.01
YSF3YNL138W-A AUA1P32450 94 aa2.51□□□□□ -2.01
YSF3YNL138W-A VPS21P36017 210 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A POP4P38336 279 aa2.51□□□□□ -2.01
YSF3YNL138W-A ECM34P38728 170 aa2.51□□□□□ -2.01
YSF3YNL138W-A RCY1P39531 840 aa2.51□□□□□ -2.01
YSF3YNL138W-A INA22P40576 216 aa2.51□□□□□ -2.01
YSF3YNL138W-A UBC13P52490 153 aa2.51□□□□□ -2.01
YSF3YNL138W-A PNC1P53184 216 aaKnown RBP2.51□□□□□ -2.01
YSF3YNL138W-A YGR168CP53293 376 aa2.51□□□□□ -2.01
YSF3YNL138W-A MPP6P53725 186 aaPredicted RBP2.51□□□□□ -2.01
YSF3YNL138W-A CSN9Q03981 162 aa2.51□□□□□ -2.01
YSF3YNL138W-A BCP1Q06338 283 aa2.51□□□□□ -2.01
YSF3YNL138W-A RRT8Q08219 342 aa2.51□□□□□ -2.01
YSF3YNL138W-A DCP1Q12517 231 aaPredicted RBP2.51□□□□□ -2.01
YSF3YNL138W-A ADF1Q2V2Q1 113 aa2.51□□□□□ -2.01
YSF3YNL138W-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
YSF3YNL138W-A TCD1P38756 429 aa2.5□□□□□ -2.01
YSF3YNL138W-A YNL320WP42840 284 aa2.5□□□□□ -2.01
YSF3YNL138W-A GTO1P48239 356 aa2.5□□□□□ -2.01
YSF3YNL138W-A RPS12P48589 143 aaKnown RBP2.5□□□□□ -2.01
YSF3YNL138W-A GIM3P53900 129 aa2.5□□□□□ -2.01
YSF3YNL138W-A YNL046WP53956 172 aa2.5□□□□□ -2.01
YSF3YNL138W-A CTS2Q06350 511 aa2.5□□□□□ -2.01
YSF3YNL138W-A SLF1Q12034 447 aaKnown RBP2.5□□□□□ -2.01
YSF3YNL138W-A RPN6Q12377 434 aa2.5□□□□□ -2.01
YSF3YNL138W-A YPR1Q12458 312 aa2.5□□□□□ -2.01
YSF3YNL138W-A YAL067W-AQ8TGK6 75 aa2.5□□□□□ -2.01
YSF3YNL138W-A YAL064W-BO13512 126 aa2.49□□□□□ -2.01
YSF3YNL138W-A KSS1P14681 368 aa2.49□□□□□ -2.01
YSF3YNL138W-A BGL2P15703 313 aaKnown RBP2.49□□□□□ -2.01
YSF3YNL138W-A MRPL25P23369 157 aa2.49□□□□□ -2.01
YSF3YNL138W-A SSO1P32867 290 aa2.49□□□□□ -2.01
YSF3YNL138W-A CTR2P38865 189 aa2.49□□□□□ -2.01
YSF3YNL138W-A CDC40P40968 455 aaPredicted RBP2.49□□□□□ -2.01
YSF3YNL138W-A RIB4P50861 169 aaPredicted RBP2.49□□□□□ -2.01
YSF3YNL138W-A EFM5P53200 248 aaKnown RBP2.49□□□□□ -2.01
YSF3YNL138W-A SRL4Q03085 281 aa2.49□□□□□ -2.01
YSF3YNL138W-A RVB1Q03940 463 aaKnown RBP2.49□□□□□ -2.01
YSF3YNL138W-A HPT1Q04178 221 aaKnown RBP2.49□□□□□ -2.01
YSF3YNL138W-A GMC1Q04399 608 aa2.49□□□□□ -2.01
YSF3YNL138W-A STE23Q06010 1027 aa2.49□□□□□ -2.01
YSF3YNL138W-A RRG8Q06109 277 aa2.49□□□□□ -2.01
YSF3YNL138W-A YLR173WQ06247 608 aa2.49□□□□□ -2.01
YSF3YNL138W-A YPR147CQ06522 304 aaKnown RBP2.49□□□□□ -2.01
YSF3YNL138W-A VAC14Q06708 880 aa2.49□□□□□ -2.01
YSF3YNL138W-A FIT3Q08907 204 aa2.49□□□□□ -2.01
YSF3YNL138W-A MHF1Q3E835 90 aa2.49□□□□□ -2.01
YSF3YNL138W-A RAD7P06779 565 aa2.48□□□□□ -2.01
YSF3YNL138W-A MER1P16523 270 aa2.48□□□□□ -2.01
YSF3YNL138W-A APA2P22108 325 aa2.48□□□□□ -2.01
YSF3YNL138W-A RAD23P32628 398 aaKnown RBP2.48□□□□□ -2.01
YSF3YNL138W-A CLB6P32943 380 aa2.48□□□□□ -2.01
YSF3YNL138W-A YKL070WP36087 169 aa2.48□□□□□ -2.01
YSF3YNL138W-A PEX32P38292 413 aa2.48□□□□□ -2.01
YSF3YNL138W-A FMC1P40491 155 aa2.48□□□□□ -2.01
YSF3YNL138W-A FMP32P43557 207 aa2.48□□□□□ -2.01
YSF3YNL138W-A NAS6P50086 228 aa2.48□□□□□ -2.01
YSF3YNL138W-A DBP6P53734 629 aaKnown RBP2.48□□□□□ -2.01
YSF3YNL138W-A GMC2Q06201 188 aa2.48□□□□□ -2.01
YSF3YNL138W-A PRP11Q07350 266 aaPredicted RBP2.48□□□□□ -2.01
YSF3YNL138W-A GET4Q12125 312 aa2.48□□□□□ -2.01
YSF3YNL138W-A PAA1Q12447 191 aaKnown RBP2.48□□□□□ -2.01
YSF3YNL138W-A GPA2P10823 449 aa2.47□□□□□ -2.01
YSF3YNL138W-A PET9P18239 318 aaKnown RBP2.47□□□□□ -2.01
YSF3YNL138W-A CSM1P25651 190 aa2.47□□□□□ -2.01
YSF3YNL138W-A ARC19P33204 171 aaKnown RBP2.47□□□□□ -2.01
YSF3YNL138W-A RPS1AP33442 255 aaKnown RBP2.47□□□□□ -2.01
YSF3YNL138W-A GPX1P36014 167 aa2.47□□□□□ -2.01
YSF3YNL138W-A YOR062CP36025 268 aa2.47□□□□□ -2.01
YSF3YNL138W-A RCK1P38622 512 aa2.47□□□□□ -2.01
YSF3YNL138W-A YHR180WP38868 163 aa2.47□□□□□ -2.01
YSF3YNL138W-A COA1P40452 197 aa2.47□□□□□ -2.01
YSF3YNL138W-A FMN1Q03778 218 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 95.4 ms