RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W YPS6P40583 537 aa5.04□□□□□ -1.6
GFD1YMR255W TRM9P49957 279 aa5.04□□□□□ -1.6
GFD1YMR255W RMD9P53140 646 aaKnown RBP5.04□□□□□ -1.6
GFD1YMR255W DUG3P53871 357 aa5.04□□□□□ -1.6
GFD1YMR255W YDR415CQ04033 374 aaPredicted RBP5.04□□□□□ -1.6
GFD1YMR255W SEI1Q06058 285 aa5.04□□□□□ -1.6
GFD1YMR255W REX3Q12090 404 aa5.04□□□□□ -1.6
GFD1YMR255W YHR213W-AQ8TGT4 77 aa5.04□□□□□ -1.6
GFD1YMR255W FUS3P16892 353 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W GLK1P17709 500 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W HNM1P19807 563 aa5.03□□□□□ -1.6
GFD1YMR255W SNC2P33328 115 aa5.03□□□□□ -1.6
GFD1YMR255W SEF1P34228 1148 aa5.03□□□□□ -1.6
GFD1YMR255W BMT5P40493 336 aa5.03□□□□□ -1.6
GFD1YMR255W GLR1P41921 483 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W BXI1P48558 297 aa5.03□□□□□ -1.6
GFD1YMR255W YGR066CP53242 292 aa5.03□□□□□ -1.6
GFD1YMR255W SMM1P53720 384 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W CWC25P53854 179 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W GIM3P53900 129 aa5.03□□□□□ -1.6
GFD1YMR255W YVH1Q02256 364 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W PET191Q02772 108 aa5.03□□□□□ -1.6
GFD1YMR255W PEX25Q02969 394 aa5.03□□□□□ -1.6
GFD1YMR255W YDR249CQ03787 373 aa5.03□□□□□ -1.6
GFD1YMR255W ANT1Q06497 328 aa5.03□□□□□ -1.6
GFD1YMR255W IRC19Q07843 230 aa5.03□□□□□ -1.6
GFD1YMR255W MIM1Q08176 113 aa5.03□□□□□ -1.6
GFD1YMR255W YRA1Q12159 226 aaKnown RBP5.03□□□□□ -1.6
GFD1YMR255W YLR108CQ12259 485 aa5.03□□□□□ -1.6
GFD1YMR255W PRP46Q12417 451 aaPredicted RBP5.03□□□□□ -1.6
GFD1YMR255W PRM4Q12498 284 aa5.03□□□□□ -1.6
GFD1YMR255W YJR112W-AQ3E743 109 aa5.03□□□□□ -1.6
GFD1YMR255W HFA1P32874 2273 aa5.03□□□□□ -1.6
GFD1YMR255W SGA1P08019 549 aa5.02□□□□□ -1.61
GFD1YMR255W CTA1P15202 515 aa5.02□□□□□ -1.61
GFD1YMR255W SEC22P22214 214 aa5.02□□□□□ -1.61
GFD1YMR255W HXT2P23585 541 aa5.02□□□□□ -1.61
GFD1YMR255W SCO1P23833 295 aa5.02□□□□□ -1.61
GFD1YMR255W MEK1P24719 497 aaPredicted RBP5.02□□□□□ -1.61
GFD1YMR255W CPR4P25334 318 aa5.02□□□□□ -1.61
GFD1YMR255W PMT2P31382 759 aa5.02□□□□□ -1.61
GFD1YMR255W FMT1P32785 401 aa5.02□□□□□ -1.61
GFD1YMR255W CBT1P36038 271 aaPredicted RBP5.02□□□□□ -1.61
GFD1YMR255W PAN3P36102 679 aaPredicted RBP5.02□□□□□ -1.61
GFD1YMR255W YPC1P38298 316 aa5.02□□□□□ -1.61
GFD1YMR255W SSH1P38353 490 aaKnown RBP5.02□□□□□ -1.61
GFD1YMR255W DLS1P40366 167 aa5.02□□□□□ -1.61
GFD1YMR255W SPG5P42933 373 aa5.02□□□□□ -1.61
GFD1YMR255W CIN2P46670 268 aa5.02□□□□□ -1.61
GFD1YMR255W OKP1P53298 406 aa5.02□□□□□ -1.61
GFD1YMR255W RVB1Q03940 463 aaKnown RBP5.02□□□□□ -1.61
GFD1YMR255W NNT1Q05874 261 aa5.02□□□□□ -1.61
GFD1YMR255W YPR147CQ06522 304 aaKnown RBP5.02□□□□□ -1.61
GFD1YMR255W SYM1Q06563 197 aa5.02□□□□□ -1.61
GFD1YMR255W EAF3Q12432 401 aa5.02□□□□□ -1.61
GFD1YMR255W PAR32Q12515 295 aaKnown RBP5.02□□□□□ -1.61
GFD1YMR255W REP2P03872 296 aa5.01□□□□□ -1.61
GFD1YMR255W CNB1P25296 175 aa5.01□□□□□ -1.61
GFD1YMR255W RPS2P25443 254 aaKnown RBP5.01□□□□□ -1.61
GFD1YMR255W EHD3P28817 500 aa5.01□□□□□ -1.61
GFD1YMR255W TRR1P29509 319 aaKnown RBP5.01□□□□□ -1.61
GFD1YMR255W ARO4P32449 370 aaKnown RBP5.01□□□□□ -1.61
GFD1YMR255W PHD1P36093 366 aa5.01□□□□□ -1.61
GFD1YMR255W FRM2P37261 193 aa5.01□□□□□ -1.61
GFD1YMR255W ERJ5P43613 295 aaPredicted RBP5.01□□□□□ -1.61
GFD1YMR255W YJR111CP47148 283 aaKnown RBP5.01□□□□□ -1.61
GFD1YMR255W PHB2P50085 310 aa5.01□□□□□ -1.61
GFD1YMR255W NIF3P53081 288 aa5.01□□□□□ -1.61
GFD1YMR255W PDR16P53860 351 aaKnown RBP5.01□□□□□ -1.61
GFD1YMR255W NRK1P53915 240 aa5.01□□□□□ -1.61
GFD1YMR255W SAM50P53969 484 aa5.01□□□□□ -1.61
GFD1YMR255W HNT3Q08702 217 aa5.01□□□□□ -1.61
GFD1YMR255W YRM1Q12340 786 aa5.01□□□□□ -1.61
GFD1YMR255W TFC7Q12415 435 aa5.01□□□□□ -1.61
GFD1YMR255W PET20Q99373 253 aa5.01□□□□□ -1.61
GFD1YMR255W PDC2P32896 925 aa5□□□□□ -1.61
GFD1YMR255W UMP1P38293 148 aa5□□□□□ -1.61
GFD1YMR255W BFR1P38934 470 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
GFD1YMR255W GCV3P39726 170 aaPredicted RBP5□□□□□ -1.61
GFD1YMR255W SSO2P39926 295 aa5□□□□□ -1.61
GFD1YMR255W YEL057CP39983 233 aa5□□□□□ -1.61
GFD1YMR255W HAM1P47119 197 aaKnown RBP5□□□□□ -1.61
GFD1YMR255W YGR126WP53274 230 aa5□□□□□ -1.61
GFD1YMR255W HNT1Q04344 158 aaKnown RBP5□□□□□ -1.61
GFD1YMR255W MCT1Q12283 360 aa5□□□□□ -1.61
GFD1YMR255W HMS1Q12398 434 aa5□□□□□ -1.61
GFD1YMR255W TFB5Q3E7C1 72 aaPredicted RBP5□□□□□ -1.61
GFD1YMR255W YIL046W-AQ3E7Z4 54 aa5□□□□□ -1.61
GFD1YMR255W FMP27Q06179 2628 aa4.99□□□□□ -1.61
GFD1YMR255W BLM10P43583 2143 aa4.99□□□□□ -1.61
GFD1YMR255W SCEIP03882 235 aa4.99□□□□□ -1.61
GFD1YMR255W MSW1P04803 379 aa4.99□□□□□ -1.61
GFD1YMR255W KRR1P25586 316 aaPredicted RBP4.99□□□□□ -1.61
GFD1YMR255W TIP1P27654 210 aaPredicted RBP4.99□□□□□ -1.61
GFD1YMR255W VMA5P31412 392 aaKnown RBP4.99□□□□□ -1.61
GFD1YMR255W UTH1P36135 365 aa4.99□□□□□ -1.61
GFD1YMR255W LAG1P38703 411 aa4.99□□□□□ -1.61
GFD1YMR255W GRE3P38715 327 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
GFD1YMR255W COS8P38723 381 aa4.99□□□□□ -1.61
GFD1YMR255W LSM12P38828 187 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms