RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	FYV6	P53913	173 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	PEX12	Q04370	399 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	CDD1	Q06549	142 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	BBP1	Q12365	385 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	DCN1	Q12395	269 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	HTB1	P02293	131 aa	Known RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	HTB2	P02294	131 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	RPL26A	P05743	127 aa	Known RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	URA6	P15700	204 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	PEX17	P40155	199 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	YNL194C	P40169	301 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	BRR6	P53062	197 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	RPL26B	P53221	127 aa	Known RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	GTR2	P53290	341 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	SSU72	P53538	206 aa	Predicted RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	RRP17	Q04031	235 aa	Predicted RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	GRH1	Q04410	372 aa	Known RBP	3.08	□□□□□ -1.92
CUS1	YMR240C	YPL257W	Q08974	193 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	GPM2	Q12008	311 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	SAS5	Q99314	248 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	HTL1	Q9URQ5	78 aa		3.08	□□□□□ -1.92
CUS1	YMR240C	TCB3	Q03640	1545 aa	Known RBP	3.07	□□□□□ -1.92
CUS1	YMR240C	MON2	P48563	1636 aa	Predicted RBP	3.07	□□□□□ -1.92
CUS1	YMR240C	SNF6	P18888	332 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	YER188W	P40103	239 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	CAT5	P41735	233 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	CWC23	P52868	283 aa	Predicted RBP	3.07	□□□□□ -1.92
CUS1	YMR240C	CAB4	P53332	305 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	PRM15	Q03262	622 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	HEM25	Q07534	307 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	SIR4	P11978	1358 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	SSN2	P38931	1420 aa		3.07	□□□□□ -1.92
CUS1	YMR240C	FBA1	P14540	359 aa	Known RBP	3.06	□□□□□ -1.92
CUS1	YMR240C	ADE1	P27616	306 aa		3.06	□□□□□ -1.92
CUS1	YMR240C	PRX1	P34227	261 aa	Known RBP	3.06	□□□□□ -1.92
CUS1	YMR240C	ARC15	P40518	154 aa	RIP-Chip data	3.06	□□□□□ -1.92	not detected
CUS1	YMR240C	NUP57	P48837	541 aa		3.06	□□□□□ -1.92
CUS1	YMR240C	MGA1	P53050	456 aa		3.06	□□□□□ -1.92
CUS1	YMR240C	YML108W	Q03759	105 aa		3.06	□□□□□ -1.92
CUS1	YMR240C	RPL28	P02406	149 aa	Known RBP	3.05	□□□□□ -1.92
CUS1	YMR240C	CCA1	P21269	546 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	SRY1	P36007	326 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	RPF1	P38805	295 aa	Known RBP	3.05	□□□□□ -1.92
CUS1	YMR240C	ALG13	P53178	202 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	NOP19	P53317	196 aa	Predicted RBP	3.05	□□□□□ -1.92
CUS1	YMR240C	YMR279C	Q03263	540 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	JLP1	Q12358	412 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	YOR020W-A	Q3E824	90 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	HSL1	P34244	1518 aa		3.05	□□□□□ -1.92
CUS1	YMR240C	QCR7	P00128	127 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	Q0255	P03881	472 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	ADH3	P07246	375 aa	Known RBP	3.04	□□□□□ -1.92
CUS1	YMR240C	DSF1	P0CX08	502 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	YNR073C	P0CX09	502 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	TAF14	P35189	244 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	YPT52	P36018	234 aa	Known RBP	3.04	□□□□□ -1.92
CUS1	YMR240C	YHR125W	P38831	101 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	IKI1	P38874	309 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	RPA43	P46669	326 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	DID2	P69771	204 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	ABF2	Q02486	183 aa		3.04	□□□□□ -1.92
CUS1	YMR240C	YDR157W	A0A023PZE8	133 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	YHR139C-A	O13536	103 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	COX5A	P00424	153 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	RFA3	P26755	122 aa	Known RBP	3.03	□□□□□ -1.92
CUS1	YMR240C	SCM4	P32564	187 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	CLB6	P32943	380 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	KDX1	P36005	433 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	FIS1	P40515	155 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	ERG10	P41338	398 aa	Known RBP	3.03	□□□□□ -1.92
CUS1	YMR240C	YJR056C	P47115	236 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	ERV29	P53337	310 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	YML096W	Q04489	525 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	YET3	Q07451	203 aa		3.03	□□□□□ -1.92
CUS1	YMR240C	NIP7	Q08962	181 aa	Known RBP	3.03	□□□□□ -1.92
CUS1	YMR240C	LSO2	Q3E772	92 aa	Known RBP	3.03	□□□□□ -1.92
CUS1	YMR240C	RPL35A	P0CX84	120 aa	Known RBP	3.02	□□□□□ -1.93
CUS1	YMR240C	RPL35B	P0CX85	120 aa	Known RBP	3.02	□□□□□ -1.93
CUS1	YMR240C	UTR5	P32630	166 aa		3.02	□□□□□ -1.93
CUS1	YMR240C	FES1	P38260	290 aa		3.02	□□□□□ -1.93
CUS1	YMR240C	YHL026C	P38740	315 aa		3.02	□□□□□ -1.93
CUS1	YMR240C	MRPL49	P40858	161 aa	Predicted RBP	3.02	□□□□□ -1.93
CUS1	YMR240C	ADO1	P47143	340 aa	Known RBP	3.02	□□□□□ -1.93
CUS1	YMR240C	YJR146W	P47174	117 aa		3.02	□□□□□ -1.93
CUS1	YMR240C	RTC4	P53850	401 aa		3.02	□□□□□ -1.93
CUS1	YMR240C	CDC28	P00546	298 aa	Known RBP	3.01	□□□□□ -1.93
CUS1	YMR240C	QCR2	P07257	368 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	ACP1	P32463	125 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	SRP14	P38985	146 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	POG1	P40473	351 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	RSM25	P40496	264 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	IRC18	P47056	224 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	TMA22	P47089	198 aa	Predicted RBP	3.01	□□□□□ -1.93
CUS1	YMR240C	YGR026W	P53217	278 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	MIX17	Q03667	156 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	RDS3	Q06835	107 aa	Predicted RBP	3.01	□□□□□ -1.93
CUS1	YMR240C	VPS68	Q12016	184 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	YCL012C	Q8J0M4	134 aa		3.01	□□□□□ -1.93
CUS1	YMR240C	UBC6	P33296	250 aa	Predicted RBP	3	□□□□□ -1.93
CUS1	YMR240C	SHG1	P38337	142 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms