RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C GCN3P14741 305 aa3.24□□□□□ -1.89
PEX12YMR026C SHG1P38337 142 aa3.24□□□□□ -1.89
PEX12YMR026C SSH1P38353 490 aaKnown RBP3.24□□□□□ -1.89
PEX12YMR026C MTW1P39731 289 aa3.24□□□□□ -1.89
PEX12YMR026C YER121WP40076 114 aa3.24□□□□□ -1.89
PEX12YMR026C MIG2P53035 382 aa3.24□□□□□ -1.89
PEX12YMR026C YGL034CP53186 121 aa3.24□□□□□ -1.89
PEX12YMR026C SYF2P53277 215 aaPredicted RBP3.24□□□□□ -1.89
PEX12YMR026C YDR248CQ03786 193 aa3.24□□□□□ -1.89
PEX12YMR026C YML096WQ04489 525 aa3.24□□□□□ -1.89
PEX12YMR026C TIM22Q12328 207 aa3.24□□□□□ -1.89
PEX12YMR026C YPL229WQ99395 206 aa3.24□□□□□ -1.89
PEX12YMR026C TRR1P29509 319 aaKnown RBP3.23□□□□□ -1.89
PEX12YMR026C UBC6P33296 250 aaPredicted RBP3.23□□□□□ -1.89
PEX12YMR026C AME1P38313 324 aa3.23□□□□□ -1.89
PEX12YMR026C YJR056CP47115 236 aa3.23□□□□□ -1.89
PEX12YMR026C ALG9P53868 555 aaKnown RBP3.23□□□□□ -1.89
PEX12YMR026C YMR279CQ03263 540 aa3.23□□□□□ -1.89
PEX12YMR026C NOC4Q06512 552 aaPredicted RBP3.23□□□□□ -1.89
PEX12YMR026C ERD2P18414 219 aa3.22□□□□□ -1.89
PEX12YMR026C MRPL28P36527 147 aa3.22□□□□□ -1.89
PEX12YMR026C PEX17P40155 199 aa3.22□□□□□ -1.89
PEX12YMR026C YLR460CP54007 376 aa3.22□□□□□ -1.89
PEX12YMR026C YPL039WQ03080 316 aa3.22□□□□□ -1.89
PEX12YMR026C MIX17Q03667 156 aa3.22□□□□□ -1.89
PEX12YMR026C GRX8Q05926 109 aa3.22□□□□□ -1.89
PEX12YMR026C USB1Q12208 290 aaKnown RBP3.22□□□□□ -1.89
PEX12YMR026C IGO2Q9P305 131 aa3.22□□□□□ -1.89
PEX12YMR026C IPP1P00817 287 aaKnown RBP3.21□□□□□ -1.9
PEX12YMR026C COS2P0CX12 379 aa3.21□□□□□ -1.9
PEX12YMR026C COS3P0CX13 379 aa3.21□□□□□ -1.9
PEX12YMR026C APS1P35181 156 aa3.21□□□□□ -1.9
PEX12YMR026C CSG2P35206 410 aa3.21□□□□□ -1.9
PEX12YMR026C ECM33P38248 429 aaKnown RBP3.21□□□□□ -1.9
PEX12YMR026C FES1P38260 290 aa3.21□□□□□ -1.9
PEX12YMR026C ERV29P53337 310 aa3.21□□□□□ -1.9
PEX12YMR026C NRK1P53915 240 aa3.21□□□□□ -1.9
PEX12YMR026C RRP17Q04031 235 aaPredicted RBP3.21□□□□□ -1.9
PEX12YMR026C EMI1Q04406 187 aa3.21□□□□□ -1.9
PEX12YMR026C AGC1Q12482 902 aa3.21□□□□□ -1.9
PEX12YMR026C HIS3P06633 220 aa3.2□□□□□ -1.9
PEX12YMR026C TRX3P25372 127 aa3.2□□□□□ -1.9
PEX12YMR026C ECM13P38195 257 aa3.2□□□□□ -1.9
PEX12YMR026C YHI9P38765 294 aa3.2□□□□□ -1.9
PEX12YMR026C SPL2P38839 148 aa3.2□□□□□ -1.9
PEX12YMR026C CAT5P41735 233 aa3.2□□□□□ -1.9
PEX12YMR026C YJL028WP47062 111 aa3.2□□□□□ -1.9
PEX12YMR026C AIM25P47140 327 aa3.2□□□□□ -1.9
PEX12YMR026C YNL140CP53910 189 aa3.2□□□□□ -1.9
PEX12YMR026C YLR036CQ07986 203 aa3.2□□□□□ -1.9
PEX12YMR026C SLD7Q08457 257 aa3.2□□□□□ -1.9
PEX12YMR026C MDM32Q12171 622 aa3.2□□□□□ -1.9
PEX12YMR026C PAN1P32521 1480 aa3.2□□□□□ -1.9
PEX12YMR026C TAH1P25638 111 aaPredicted RBP3.19□□□□□ -1.9
PEX12YMR026C FIG1P38224 298 aa3.19□□□□□ -1.9
PEX12YMR026C MRPL49P40858 161 aaPredicted RBP3.19□□□□□ -1.9
PEX12YMR026C ILM1P47155 203 aa3.19□□□□□ -1.9
PEX12YMR026C RTC4P53850 401 aa3.19□□□□□ -1.9
PEX12YMR026C YNL247WP53852 767 aaKnown RBP3.19□□□□□ -1.9
PEX12YMR026C YOL019WQ08157 551 aa3.19□□□□□ -1.9
PEX12YMR026C NUP157P40064 1391 aaKnown RBP3.18□□□□□ -1.9
PEX12YMR026C MRS1P07266 363 aa3.18□□□□□ -1.9
PEX12YMR026C PTM1P32857 523 aa3.18□□□□□ -1.9
PEX12YMR026C FAR7P43592 221 aa3.18□□□□□ -1.9
PEX12YMR026C BRX1Q08235 291 aaKnown RBP3.18□□□□□ -1.9
PEX12YMR026C YOL160WQ08321 113 aa3.18□□□□□ -1.9
PEX12YMR026C YHR214C-EQ8TGK0 99 aa3.18□□□□□ -1.9
PEX12YMR026C YHR139C-AO13536 103 aa3.17□□□□□ -1.9
PEX12YMR026C SEC22P22214 214 aa3.17□□□□□ -1.9
PEX12YMR026C YPT52P36018 234 aaKnown RBP3.17□□□□□ -1.9
PEX12YMR026C YER076CP40049 302 aa3.17□□□□□ -1.9
PEX12YMR026C YER188WP40103 239 aa3.17□□□□□ -1.9
PEX12YMR026C PDS1P40316 373 aaPredicted RBP3.17□□□□□ -1.9
PEX12YMR026C YGL235WP53071 178 aa3.17□□□□□ -1.9
PEX12YMR026C PET191Q02772 108 aa3.17□□□□□ -1.9
PEX12YMR026C PEX12Q04370 399 aa3.17□□□□□ -1.9
PEX12YMR026C YOL024WQ08172 172 aa3.17□□□□□ -1.9
PEX12YMR026C PST1Q12355 444 aa3.17□□□□□ -1.9
PEX12YMR026C MEI4P29467 408 aa3.16□□□□□ -1.9
PEX12YMR026C TMA22P47089 198 aaPredicted RBP3.16□□□□□ -1.9
PEX12YMR026C YOR283WQ12040 230 aaKnown RBP3.16□□□□□ -1.9
PEX12YMR026C YEL009C-AA0A023PZF2 135 aa3.15□□□□□ -1.91
PEX12YMR026C RPL25P04456 142 aaKnown RBP3.15□□□□□ -1.91
PEX12YMR026C ACP1P32463 125 aa3.15□□□□□ -1.91
PEX12YMR026C KDX1P36005 433 aa3.15□□□□□ -1.91
PEX12YMR026C MSA2P36157 363 aa3.15□□□□□ -1.91
PEX12YMR026C MAK5P38112 773 aaPredicted RBP3.15□□□□□ -1.91
PEX12YMR026C RMD6P39975 231 aa3.15□□□□□ -1.91
PEX12YMR026C PIR5P46999 287 aa3.15□□□□□ -1.91
PEX12YMR026C PRM8P53174 237 aa3.15□□□□□ -1.91
PEX12YMR026C LSM7P53905 115 aaKnown RBP3.15□□□□□ -1.91
PEX12YMR026C YBL112CQ3E7Y4 105 aa3.15□□□□□ -1.91
PEX12YMR026C SEC4P07560 215 aaKnown RBP3.14□□□□□ -1.91
PEX12YMR026C RPS28BP0C0X0 67 aaKnown RBP3.14□□□□□ -1.91
PEX12YMR026C ERG24P32462 438 aaKnown RBP3.14□□□□□ -1.91
PEX12YMR026C YKR041WP36134 250 aa3.14□□□□□ -1.91
PEX12YMR026C DOG2P38773 246 aa3.14□□□□□ -1.91
PEX12YMR026C DOG1P38774 246 aa3.14□□□□□ -1.91
PEX12YMR026C MED6P38782 295 aa3.14□□□□□ -1.91
PEX12YMR026C TEM1P38987 245 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms