RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IFH1	YLR223C	PRE7	P23724	241 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	RPL24B	P24000	155 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	ATP7	P30902	174 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	TFC1	P32367	649 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	YKL070W	P36087	169 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	TVP38	P36164	337 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	YPT31	P38555	223 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	AIM18	P38884	321 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	MNN9	P39107	395 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	KRE29	P40026	464 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	RGI1	P40043	161 aa	Predicted RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	FMC1	P40491	155 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	GLR1	P41921	483 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	GET1	P53192	235 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	CWC27	Q02770	301 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	MYO5	Q04439	1219 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	SEC13	Q04491	297 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	YPL150W	Q12152	901 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	MRX4	Q12467	430 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	PSF1	Q12488	208 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	ROM2	P51862	1356 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	BPT1	P14772	1559 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	HAP1	P0CE41	1502 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	NUP159	P40477	1460 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	RAD10	P06838	210 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	YBR121C-A	P0C5L4	52 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	DDI2	P0CH63	225 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	DDI3	P0CH64	225 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	TCP1	P12612	559 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	OCH1	P31755	480 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	DER1	P38307	211 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	MIC12	P38341	106 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	CUE1	P38428	203 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	RMD6	P39975	231 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	YKE4	P40544	346 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	GDS1	P41913	522 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	TMA22	P47089	198 aa	Predicted RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	JHD2	P47156	728 aa	Predicted RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	YJR149W	P47177	404 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	RIB4	P50861	169 aa	Predicted RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	NBP35	P52920	328 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	UFD1	P53044	361 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	DBP6	P53734	629 aa	Known RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	YPR064W	Q12492	139 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	DCP1	Q12517	231 aa	Predicted RBP	0.87	□□□□□ -2.27
IFH1	YLR223C	YOS9	Q99220	542 aa		0.87	□□□□□ -2.27
IFH1	YLR223C	HTB1	P02293	131 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	HTB2	P02294	131 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	CDC33	P07260	213 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	SEC22	P22214	214 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	MIG1	P27705	504 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	GPX1	P36014	167 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YBL081W	P38180	368 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	LDB7	P38210	180 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	PRE6	P40303	254 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	SER33	P40510	469 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	RPC17	P47076	161 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	MOG1	P47123	218 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	ILM1	P47155	203 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	RCF2	P53721	224 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	CTF19	Q02732	369 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YMR209C	Q03648	457 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	AIM34	Q03673	198 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YDR222W	Q04925	415 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YLR283W	Q05867	314 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	CUR1	Q06469	252 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	HRT1	Q08273	121 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YPL225W	Q08971	146 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	YPL264C	Q08980	353 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YOR029W	Q12243	111 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	BBP1	Q12365	385 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YHR213W-A	Q8TGT4	77 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	RSF2	P46974	1380 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	SPO14	P36126	1683 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	RPL28	P02406	149 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	FRS2	P15625	503 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	POF1	P25576	258 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	BUB2	P26448	306 aa	Predicted RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	PEX4	P29340	183 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	PRP18	P33411	251 aa	Predicted RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	CLG1	P35190	452 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YKR032W	P36127	104 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YCR087C-A	P37263	153 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	NPT1	P39683	429 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	YNL194C	P40169	301 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	FIS1	P40515	155 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	HYR1	P40581	163 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	FMP32	P43557	207 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	OTU1	P43558	301 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YJR111C	P47148	283 aa	Known RBP	0.86	□□□□□ -2.27
IFH1	YLR223C	SOL1	P50278	321 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	DOC1	P53068	250 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	TIM21	P53220	239 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YIP3	P53633	176 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YDR209C	Q03480	137 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	SDH7	Q04401	133 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	MGR3	Q04472	501 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	YML096W	Q04489	525 aa		0.86	□□□□□ -2.27
IFH1	YLR223C	PEX10	Q05568	337 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms