RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YOR186WQ08560 144 aa1.71□□□□□ -2.14
SHE2YKL130C YPL264CQ08980 353 aa1.71□□□□□ -2.14
SHE2YKL130C SMT3Q12306 101 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C IES3Q12345 250 aa1.71□□□□□ -2.14
SHE2YKL130C ISD11Q6Q560 94 aa1.71□□□□□ -2.14
SHE2YKL130C RSF2P46974 1380 aa1.71□□□□□ -2.14
SHE2YKL130C USO1P25386 1790 aa1.7□□□□□ -2.14
SHE2YKL130C YOL163WP0CF20 169 aa1.7□□□□□ -2.14
SHE2YKL130C MATALPHA2P0CY08 210 aa1.7□□□□□ -2.14
SHE2YKL130C HMLALPHA2P0CY09 210 aa1.7□□□□□ -2.14
SHE2YKL130C CBF1P17106 351 aa1.7□□□□□ -2.14
SHE2YKL130C PRE7P23724 241 aaKnown RBP1.7□□□□□ -2.14
SHE2YKL130C PRX1P34227 261 aaKnown RBP1.7□□□□□ -2.14
SHE2YKL130C YBL081WP38180 368 aaKnown RBP1.7□□□□□ -2.14
SHE2YKL130C ILM1P47155 203 aa1.7□□□□□ -2.14
SHE2YKL130C NUP57P48837 541 aa1.7□□□□□ -2.14
SHE2YKL130C MGA1P53050 456 aa1.7□□□□□ -2.14
SHE2YKL130C BRR6P53062 197 aa1.7□□□□□ -2.14
SHE2YKL130C YPL039WQ03080 316 aa1.7□□□□□ -2.14
SHE2YKL130C SLD7Q08457 257 aa1.7□□□□□ -2.14
SHE2YKL130C ABP140Q08641 628 aaKnown RBP1.7□□□□□ -2.14
SHE2YKL130C TPO4Q12256 659 aa1.7□□□□□ -2.14
SHE2YKL130C PST1Q12355 444 aa1.7□□□□□ -2.14
SHE2YKL130C YDR157WA0A023PZE8 133 aa1.69□□□□□ -2.14
SHE2YKL130C HTB1P02293 131 aaKnown RBP1.69□□□□□ -2.14
SHE2YKL130C HTB2P02294 131 aa1.69□□□□□ -2.14
SHE2YKL130C URA6P15700 204 aa1.69□□□□□ -2.14
SHE2YKL130C ERD2P18414 219 aa1.69□□□□□ -2.14
SHE2YKL130C PPH21P23594 369 aa1.69□□□□□ -2.14
SHE2YKL130C SFC1P33303 322 aa1.69□□□□□ -2.14
SHE2YKL130C IKI1P38874 309 aa1.69□□□□□ -2.14
SHE2YKL130C YER189WP40104 122 aa1.69□□□□□ -2.14
SHE2YKL130C YIR035CP40579 254 aa1.69□□□□□ -2.14
SHE2YKL130C YFR045WP43617 309 aa1.69□□□□□ -2.14
SHE2YKL130C IRC18P47056 224 aa1.69□□□□□ -2.14
SHE2YKL130C YJL028WP47062 111 aa1.69□□□□□ -2.14
SHE2YKL130C ADO1P47143 340 aaKnown RBP1.69□□□□□ -2.14
SHE2YKL130C YJR149WP47177 404 aa1.69□□□□□ -2.14
SHE2YKL130C ALG13P53178 202 aa1.69□□□□□ -2.14
SHE2YKL130C GET1P53192 235 aa1.69□□□□□ -2.14
SHE2YKL130C HST4P53688 370 aa1.69□□□□□ -2.14
SHE2YKL130C YNL046WP53956 172 aa1.69□□□□□ -2.14
SHE2YKL130C SNZ1Q03148 297 aa1.69□□□□□ -2.14
SHE2YKL130C YML108WQ03759 105 aa1.69□□□□□ -2.14
SHE2YKL130C PRR2Q12310 699 aa1.69□□□□□ -2.14
SHE2YKL130C YBL112CQ3E7Y4 105 aa1.69□□□□□ -2.14
SHE2YKL130C SIR4P11978 1358 aa1.69□□□□□ -2.14
SHE2YKL130C YLR419WQ06698 1435 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C IPP1P00817 287 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C RPS24AP0CX31 135 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C RPS24BP0CX32 135 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C RNP1P32385 249 aa1.68□□□□□ -2.14
SHE2YKL130C ASF2P32448 525 aaPredicted RBP1.68□□□□□ -2.14
SHE2YKL130C AST1P35183 429 aa1.68□□□□□ -2.14
SHE2YKL130C TAF14P35189 244 aa1.68□□□□□ -2.14
SHE2YKL130C PRY2P36110 329 aa1.68□□□□□ -2.14
SHE2YKL130C ECM13P38195 257 aa1.68□□□□□ -2.14
SHE2YKL130C OST3P48439 350 aa1.68□□□□□ -2.14
SHE2YKL130C YGL034CP53186 121 aa1.68□□□□□ -2.14
SHE2YKL130C ALG9P53868 555 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C YPR172WQ06608 200 aa1.68□□□□□ -2.14
SHE2YKL130C YOL019WQ08157 551 aa1.68□□□□□ -2.14
SHE2YKL130C YPR011CQ12251 326 aa1.68□□□□□ -2.14
SHE2YKL130C TIM22Q12328 207 aa1.68□□□□□ -2.14
SHE2YKL130C TY3B-IQ7LHG5 1498 aaKnown RBP1.68□□□□□ -2.14
SHE2YKL130C YLR462WO13556 202 aa1.67□□□□□ -2.14
SHE2YKL130C ZWF1P11412 505 aaKnown RBP1.67□□□□□ -2.14
SHE2YKL130C RFA3P26755 122 aaKnown RBP1.67□□□□□ -2.14
SHE2YKL130C TKL2P33315 681 aa1.67□□□□□ -2.14
SHE2YKL130C TRM5P38793 499 aa1.67□□□□□ -2.14
SHE2YKL130C YEL075CP39972 122 aa1.67□□□□□ -2.14
SHE2YKL130C ECO1P43605 281 aa1.67□□□□□ -2.14
SHE2YKL130C BUD13P46947 266 aaPredicted RBP1.67□□□□□ -2.14
SHE2YKL130C BXI1P48558 297 aa1.67□□□□□ -2.14
SHE2YKL130C MIG2P53035 382 aa1.67□□□□□ -2.14
SHE2YKL130C TOS8P53147 276 aa1.67□□□□□ -2.14
SHE2YKL130C NOP19P53317 196 aaPredicted RBP1.67□□□□□ -2.14
SHE2YKL130C PDR17P53844 350 aa1.67□□□□□ -2.14
SHE2YKL130C EMI1Q04406 187 aa1.67□□□□□ -2.14
SHE2YKL130C YDR222WQ04925 415 aa1.67□□□□□ -2.14
SHE2YKL130C YPR063CQ12160 140 aa1.67□□□□□ -2.14
SHE2YKL130C EMP46Q12396 444 aa1.67□□□□□ -2.14
SHE2YKL130C MRX4Q12467 430 aa1.67□□□□□ -2.14
SHE2YKL130C YPL247CQ12523 523 aa1.67□□□□□ -2.14
SHE2YKL130C LSO2Q3E772 92 aaKnown RBP1.67□□□□□ -2.14
SHE2YKL130C QCR7P00128 127 aa1.66□□□□□ -2.14
SHE2YKL130C COX5AP00424 153 aa1.66□□□□□ -2.14
SHE2YKL130C CDC28P00546 298 aaKnown RBP1.66□□□□□ -2.14
SHE2YKL130C BMT5P40493 336 aa1.66□□□□□ -2.14
SHE2YKL130C CAT5P41735 233 aa1.66□□□□□ -2.14
SHE2YKL130C FAR7P43592 221 aa1.66□□□□□ -2.14
SHE2YKL130C EAF6P47128 113 aa1.66□□□□□ -2.14
SHE2YKL130C RMR1P53060 241 aa1.66□□□□□ -2.14
SHE2YKL130C HOP2P53187 214 aa1.66□□□□□ -2.14
SHE2YKL130C DID2P69771 204 aa1.66□□□□□ -2.14
SHE2YKL130C ABF2Q02486 183 aa1.66□□□□□ -2.14
SHE2YKL130C FAR8Q05040 523 aa1.66□□□□□ -2.14
SHE2YKL130C YCL012CQ8J0M4 134 aa1.66□□□□□ -2.14
SHE2YKL130C HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
SHE2YKL130C ADE6P38972 1358 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms