RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YOR020W-AQ3E824 90 aa3.63□□□□□ -1.83
SPC42YKL042W RPL27AP0C2H6 136 aaKnown RBP3.62□□□□□ -1.83
SPC42YKL042W RPL27BP0C2H7 136 aaKnown RBP3.62□□□□□ -1.83
SPC42YKL042W OAC1P32332 324 aa3.62□□□□□ -1.83
SPC42YKL042W RPF1P38805 295 aaKnown RBP3.62□□□□□ -1.83
SPC42YKL042W FIS1P40515 155 aa3.62□□□□□ -1.83
SPC42YKL042W PDR17P53844 350 aa3.62□□□□□ -1.83
SPC42YKL042W ABF2Q02486 183 aa3.62□□□□□ -1.83
SPC42YKL042W SAS5Q99314 248 aa3.62□□□□□ -1.83
SPC42YKL042W RAD9P14737 1309 aa3.62□□□□□ -1.83
SPC42YKL042W MIG1P27705 504 aa3.61□□□□□ -1.83
SPC42YKL042W APS1P35181 156 aa3.61□□□□□ -1.83
SPC42YKL042W SPO73P40031 143 aa3.61□□□□□ -1.83
SPC42YKL042W BMT5P40493 336 aa3.61□□□□□ -1.83
SPC42YKL042W ARC15P40518 154 aaRIP-Chip data3.61□□□□□ -1.83not detected
SPC42YKL042W RPA43P46669 326 aa3.61□□□□□ -1.83
SPC42YKL042W PEX12Q04370 399 aa3.61□□□□□ -1.83
SPC42YKL042W YCL012CQ8J0M4 134 aa3.61□□□□□ -1.83
SPC42YKL042W YPR096CO13587 100 aa3.6□□□□□ -1.83
SPC42YKL042W ADH3P07246 375 aaKnown RBP3.6□□□□□ -1.83
SPC42YKL042W FCY2P17064 533 aa3.6□□□□□ -1.83
SPC42YKL042W SPS18P32572 300 aa3.6□□□□□ -1.83
SPC42YKL042W YKR032WP36127 104 aa3.6□□□□□ -1.83
SPC42YKL042W YCR087C-AP37263 153 aa3.6□□□□□ -1.83
SPC42YKL042W YAR068WP39564 161 aa3.6□□□□□ -1.83
SPC42YKL042W TIF34P40217 347 aaKnown RBP3.6□□□□□ -1.83
SPC42YKL042W FAR7P43592 221 aa3.6□□□□□ -1.83
SPC42YKL042W YJR056CP47115 236 aa3.6□□□□□ -1.83
SPC42YKL042W PRM8P53174 237 aa3.6□□□□□ -1.83
SPC42YKL042W NOP19P53317 196 aaPredicted RBP3.6□□□□□ -1.83
SPC42YKL042W SSU72P53538 206 aaPredicted RBP3.6□□□□□ -1.83
SPC42YKL042W YMD8Q03697 442 aa3.6□□□□□ -1.83
SPC42YKL042W DPM1P14020 267 aaKnown RBP3.59□□□□□ -1.83
SPC42YKL042W GCN3P14741 305 aa3.59□□□□□ -1.83
SPC42YKL042W YHR125WP38831 101 aa3.59□□□□□ -1.83
SPC42YKL042W YER188WP40103 239 aa3.59□□□□□ -1.83
SPC42YKL042W YRB2P40517 327 aa3.59□□□□□ -1.83
SPC42YKL042W YJL144WP47009 104 aa3.59□□□□□ -1.83
SPC42YKL042W YJL016WP47072 561 aa3.59□□□□□ -1.83
SPC42YKL042W ATG39Q06159 398 aa3.59□□□□□ -1.83
SPC42YKL042W QCR7P00128 127 aa3.58□□□□□ -1.84
SPC42YKL042W Q0255P03881 472 aa3.58□□□□□ -1.84
SPC42YKL042W APA2P22108 325 aa3.58□□□□□ -1.84
SPC42YKL042W SDH4P37298 181 aa3.58□□□□□ -1.84
SPC42YKL042W YBR063CP38083 404 aa3.58□□□□□ -1.84
SPC42YKL042W DOG2P38773 246 aa3.58□□□□□ -1.84
SPC42YKL042W DOG1P38774 246 aa3.58□□□□□ -1.84
SPC42YKL042W DID2P69771 204 aa3.58□□□□□ -1.84
SPC42YKL042W TRM5P38793 499 aa3.57□□□□□ -1.84
SPC42YKL042W COG3P40094 801 aa3.57□□□□□ -1.84
SPC42YKL042W CAB4P53332 305 aa3.57□□□□□ -1.84
SPC42YKL042W SNZ1Q03148 297 aa3.57□□□□□ -1.84
SPC42YKL042W YMR279CQ03263 540 aa3.57□□□□□ -1.84
SPC42YKL042W YPR170W-BP0C5R9 85 aa3.56□□□□□ -1.84
SPC42YKL042W MER1P16523 270 aa3.56□□□□□ -1.84
SPC42YKL042W ASF2P32448 525 aaPredicted RBP3.56□□□□□ -1.84
SPC42YKL042W ECM33P38248 429 aaKnown RBP3.56□□□□□ -1.84
SPC42YKL042W GRE3P38715 327 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
SPC42YKL042W CLP1Q08685 445 aaPredicted RBP3.56□□□□□ -1.84
SPC42YKL042W YHR032W-AP0C5N6 59 aa3.55□□□□□ -1.84
SPC42YKL042W LPP1Q04396 274 aa3.55□□□□□ -1.84
SPC42YKL042W CCA1P21269 546 aa3.54□□□□□ -1.84
SPC42YKL042W ADE1P27616 306 aa3.54□□□□□ -1.84
SPC42YKL042W IRC22P40006 225 aa3.54□□□□□ -1.84
SPC42YKL042W YGR026WP53217 278 aa3.54□□□□□ -1.84
SPC42YKL042W RPL26AP05743 127 aaKnown RBP3.53□□□□□ -1.84
SPC42YKL042W SEC4P07560 215 aaKnown RBP3.53□□□□□ -1.84
SPC42YKL042W RSM25P40496 264 aa3.53□□□□□ -1.84
SPC42YKL042W MMS2P53152 137 aa3.53□□□□□ -1.84
SPC42YKL042W HOP2P53187 214 aa3.53□□□□□ -1.84
SPC42YKL042W RPL26BP53221 127 aaKnown RBP3.53□□□□□ -1.84
SPC42YKL042W AKR2Q12013 749 aa3.53□□□□□ -1.84
SPC42YKL042W TCA17P32613 152 aa3.52□□□□□ -1.85
SPC42YKL042W VMA11P32842 164 aa3.52□□□□□ -1.85
SPC42YKL042W MRPL28P36527 147 aa3.52□□□□□ -1.85
SPC42YKL042W SMD3P43321 101 aaKnown RBP3.52□□□□□ -1.85
SPC42YKL042W RDS3Q06835 107 aaPredicted RBP3.52□□□□□ -1.85
SPC42YKL042W MDM32Q12171 622 aa3.52□□□□□ -1.85
SPC42YKL042W TDA8Q6B2U8 126 aa3.52□□□□□ -1.85
SPC42YKL042W ATG22P25568 528 aa3.51□□□□□ -1.85
SPC42YKL042W SCM4P32564 187 aa3.51□□□□□ -1.85
SPC42YKL042W YHL026CP38740 315 aa3.51□□□□□ -1.85
SPC42YKL042W CTR2P38865 189 aa3.51□□□□□ -1.85
SPC42YKL042W RMD6P39975 231 aa3.51□□□□□ -1.85
SPC42YKL042W YNL010WP53981 241 aaKnown RBP3.51□□□□□ -1.85
SPC42YKL042W PET191Q02772 108 aa3.51□□□□□ -1.85
SPC42YKL042W CDD1Q06549 142 aa3.51□□□□□ -1.85
SPC42YKL042W HRT1Q08273 121 aa3.51□□□□□ -1.85
SPC42YKL042W GPM2Q12008 311 aa3.51□□□□□ -1.85
SPC42YKL042W YJR146WP47174 117 aa3.5□□□□□ -1.85
SPC42YKL042W DSK2P48510 373 aa3.5□□□□□ -1.85
SPC42YKL042W LSM7P53905 115 aaKnown RBP3.5□□□□□ -1.85
SPC42YKL042W GAS3Q03655 524 aa3.5□□□□□ -1.85
SPC42YKL042W YHR214C-EQ8TGK0 99 aa3.5□□□□□ -1.85
SPC42YKL042W RPL25P04456 142 aaKnown RBP3.49□□□□□ -1.85
SPC42YKL042W RPL9AP05738 191 aaKnown RBP3.49□□□□□ -1.85
SPC42YKL042W CDC7P06243 507 aa3.49□□□□□ -1.85
SPC42YKL042W PTM1P32857 523 aa3.49□□□□□ -1.85
SPC42YKL042W POP4P38336 279 aa3.49□□□□□ -1.85
SPC42YKL042W YIL001WP40560 513 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 207.8 ms