RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeastyeast

Gene FIP1, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FIP1YJR093C FYV6P53913 173 aa2.38□□□□□ -2.03
FIP1YJR093C ATG39Q06159 398 aa2.38□□□□□ -2.03
FIP1YJR093C CDD1Q06549 142 aa2.38□□□□□ -2.03
FIP1YJR093C CDC28P00546 298 aaKnown RBP2.37□□□□□ -2.03
FIP1YJR093C FCY2P17064 533 aa2.37□□□□□ -2.03
FIP1YJR093C SSO1P32867 290 aa2.37□□□□□ -2.03
FIP1YJR093C PRX1P34227 261 aaKnown RBP2.37□□□□□ -2.03
FIP1YJR093C SNX4P47057 423 aa2.37□□□□□ -2.03
FIP1YJR093C NUP57P48837 541 aa2.37□□□□□ -2.03
FIP1YJR093C BRR6P53062 197 aa2.37□□□□□ -2.03
FIP1YJR093C YML096WQ04489 525 aa2.37□□□□□ -2.03
FIP1YJR093C DRS2P39524 1355 aa2.36□□□□□ -2.03
FIP1YJR093C CCA1P21269 546 aa2.36□□□□□ -2.03
FIP1YJR093C SCM4P32564 187 aa2.36□□□□□ -2.03
FIP1YJR093C TAF14P35189 244 aa2.36□□□□□ -2.03
FIP1YJR093C ECM33P38248 429 aaKnown RBP2.36□□□□□ -2.03
FIP1YJR093C YAR068WP39564 161 aa2.36□□□□□ -2.03
FIP1YJR093C YMR279CQ03263 540 aa2.36□□□□□ -2.03
FIP1YJR093C CWC21Q03375 135 aaKnown RBP2.36□□□□□ -2.03
FIP1YJR093C BNA7Q04066 261 aa2.36□□□□□ -2.03
FIP1YJR093C AKR2Q12013 749 aa2.36□□□□□ -2.03
FIP1YJR093C ADF1Q2V2Q1 113 aa2.36□□□□□ -2.03
FIP1YJR093C YOR020W-AQ3E824 90 aa2.36□□□□□ -2.03
FIP1YJR093C NCB2Q92317 146 aa2.36□□□□□ -2.03
FIP1YJR093C OAC1P32332 324 aa2.35□□□□□ -2.03
FIP1YJR093C YJR056CP47115 236 aa2.35□□□□□ -2.03
FIP1YJR093C JLP1Q12358 412 aa2.35□□□□□ -2.03
FIP1YJR093C YPR170W-BP0C5R9 85 aa2.34□□□□□ -2.03
FIP1YJR093C YBR063CP38083 404 aa2.34□□□□□ -2.03
FIP1YJR093C SIP3P38717 1229 aa2.34□□□□□ -2.03
FIP1YJR093C BXI1P48558 297 aa2.34□□□□□ -2.03
FIP1YJR093C ADH3P07246 375 aaKnown RBP2.33□□□□□ -2.04
FIP1YJR093C SNF6P18888 332 aa2.33□□□□□ -2.04
FIP1YJR093C VMA11P32842 164 aa2.33□□□□□ -2.04
FIP1YJR093C IRC22P40006 225 aa2.33□□□□□ -2.04
FIP1YJR093C YGR026WP53217 278 aa2.33□□□□□ -2.04
FIP1YJR093C YDR248CQ03786 193 aa2.33□□□□□ -2.04
FIP1YJR093C SSQ1Q05931 657 aaPredicted RBP2.33□□□□□ -2.04
FIP1YJR093C MHT1Q12525 324 aa2.33□□□□□ -2.04
FIP1YJR093C GRX2P17695 143 aaKnown RBP2.32□□□□□ -2.04
FIP1YJR093C SPS18P32572 300 aa2.32□□□□□ -2.04
FIP1YJR093C YOR062CP36025 268 aa2.32□□□□□ -2.04
FIP1YJR093C DAN1P47178 298 aa2.32□□□□□ -2.04
FIP1YJR093C ABF2Q02486 183 aa2.32□□□□□ -2.04
FIP1YJR093C CGI121Q03705 181 aaKnown RBP2.32□□□□□ -2.04
FIP1YJR093C EMC6Q12431 108 aa2.32□□□□□ -2.04
FIP1YJR093C TUS1Q06412 1307 aa2.32□□□□□ -2.04
FIP1YJR093C IDH1P28834 360 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
FIP1YJR093C DOG2P38773 246 aa2.31□□□□□ -2.04
FIP1YJR093C DOG1P38774 246 aa2.31□□□□□ -2.04
FIP1YJR093C YMD8Q03697 442 aa2.31□□□□□ -2.04
FIP1YJR093C TRM12Q04235 462 aa2.31□□□□□ -2.04
FIP1YJR093C YRA1Q12159 226 aaKnown RBP2.31□□□□□ -2.04
FIP1YJR093C HTB1P02293 131 aaKnown RBP2.3□□□□□ -2.04
FIP1YJR093C HTB2P02294 131 aa2.3□□□□□ -2.04
FIP1YJR093C RPL9AP05738 191 aaKnown RBP2.3□□□□□ -2.04
FIP1YJR093C CBF1P17106 351 aa2.3□□□□□ -2.04
FIP1YJR093C RFA3P26755 122 aaKnown RBP2.3□□□□□ -2.04
FIP1YJR093C APS1P35181 156 aa2.3□□□□□ -2.04
FIP1YJR093C GRE3P38715 327 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
FIP1YJR093C FAR7P43592 221 aa2.3□□□□□ -2.04
FIP1YJR093C MNN5P46982 586 aa2.3□□□□□ -2.04
FIP1YJR093C YJL027CP47063 138 aaPredicted RBP2.3□□□□□ -2.04
FIP1YJR093C RPL9BP51401 191 aaKnown RBP2.3□□□□□ -2.04
FIP1YJR093C CUS2P53830 285 aaPredicted RBP2.3□□□□□ -2.04
FIP1YJR093C PDR17P53844 350 aa2.3□□□□□ -2.04
FIP1YJR093C LPP1Q04396 274 aa2.3□□□□□ -2.04
FIP1YJR093C ARR2Q06597 130 aa2.3□□□□□ -2.04
FIP1YJR093C LSO2Q3E772 92 aaKnown RBP2.3□□□□□ -2.04
FIP1YJR093C MSW1P04803 379 aa2.29□□□□□ -2.04
FIP1YJR093C MATALPHA2P0CY08 210 aa2.29□□□□□ -2.04
FIP1YJR093C HMLALPHA2P0CY09 210 aa2.29□□□□□ -2.04
FIP1YJR093C TCA17P32613 152 aa2.29□□□□□ -2.04
FIP1YJR093C YHR180WP38868 163 aa2.29□□□□□ -2.04
FIP1YJR093C IKI1P38874 309 aa2.29□□□□□ -2.04
FIP1YJR093C YIL001WP40560 513 aa2.29□□□□□ -2.04
FIP1YJR093C PRM8P53174 237 aa2.29□□□□□ -2.04
FIP1YJR093C YNL010WP53981 241 aaKnown RBP2.29□□□□□ -2.04
FIP1YJR093C PET191Q02772 108 aa2.29□□□□□ -2.04
FIP1YJR093C ATO3Q12359 275 aa2.29□□□□□ -2.04
FIP1YJR093C PSF1Q12488 208 aa2.29□□□□□ -2.04
FIP1YJR093C TDA8Q6B2U8 126 aa2.29□□□□□ -2.04
FIP1YJR093C YCL012CQ8J0M4 134 aa2.29□□□□□ -2.04
FIP1YJR093C CDC8P00572 216 aa2.28□□□□□ -2.04
FIP1YJR093C PUT1P09368 476 aa2.28□□□□□ -2.04
FIP1YJR093C GCN3P14741 305 aa2.28□□□□□ -2.04
FIP1YJR093C FCY21P40039 528 aa2.28□□□□□ -2.04
FIP1YJR093C RFC4P40339 323 aaKnown RBP2.28□□□□□ -2.04
FIP1YJR093C DID2P69771 204 aa2.28□□□□□ -2.04
FIP1YJR093C MRPS17Q03246 237 aaPredicted RBP2.28□□□□□ -2.04
FIP1YJR093C GAS3Q03655 524 aa2.28□□□□□ -2.04
FIP1YJR093C YHR214C-EQ8TGK0 99 aa2.28□□□□□ -2.04
FIP1YJR093C RAS2P01120 322 aaKnown RBP2.27□□□□□ -2.05
FIP1YJR093C ATG22P25568 528 aa2.27□□□□□ -2.05
FIP1YJR093C PRM10P42946 383 aa2.27□□□□□ -2.05
FIP1YJR093C IRC18P47056 224 aa2.27□□□□□ -2.05
FIP1YJR093C CGR1P53188 120 aa2.27□□□□□ -2.05
FIP1YJR093C MRPS8Q03799 155 aa2.27□□□□□ -2.05
FIP1YJR093C SPG3Q04398 127 aaPredicted RBP2.27□□□□□ -2.05
FIP1YJR093C NEJ1Q06148 342 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms