RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A NAG1Q8TGN9 163 aa2.5□□□□□ -2.01
EFG1YGR271C-A CMD1P06787 147 aaKnown RBP2.49□□□□□ -2.01
EFG1YGR271C-A SEC4P07560 215 aaKnown RBP2.49□□□□□ -2.01
EFG1YGR271C-A BGL2P15703 313 aaKnown RBP2.49□□□□□ -2.01
EFG1YGR271C-A SEC22P22214 214 aa2.49□□□□□ -2.01
EFG1YGR271C-A YCR025CP25352 136 aa2.49□□□□□ -2.01
EFG1YGR271C-A UBC8P28263 218 aa2.49□□□□□ -2.01
EFG1YGR271C-A IMP1P28627 190 aa2.49□□□□□ -2.01
EFG1YGR271C-A UPS2P35200 230 aa2.49□□□□□ -2.01
EFG1YGR271C-A MRPL27P36526 146 aaPredicted RBP2.49□□□□□ -2.01
EFG1YGR271C-A SHE1P38200 338 aa2.49□□□□□ -2.01
EFG1YGR271C-A POP8P38208 133 aa2.49□□□□□ -2.01
EFG1YGR271C-A ARN2P38724 620 aa2.49□□□□□ -2.01
EFG1YGR271C-A CYC2P38909 366 aa2.49□□□□□ -2.01
EFG1YGR271C-A ILM1P47155 203 aa2.49□□□□□ -2.01
EFG1YGR271C-A YNL184CP53876 108 aa2.49□□□□□ -2.01
EFG1YGR271C-A YLR031WQ07978 186 aa2.49□□□□□ -2.01
EFG1YGR271C-A TIR4Q12218 487 aaPredicted RBP2.49□□□□□ -2.01
EFG1YGR271C-A PRM7Q12459 698 aa2.49□□□□□ -2.01
EFG1YGR271C-A PEX11Q12462 236 aa2.49□□□□□ -2.01
EFG1YGR271C-A EFG1Q3E705 233 aaKnown RBP2.49□□□□□ -2.01
EFG1YGR271C-A YPL229WQ99395 206 aa2.49□□□□□ -2.01
EFG1YGR271C-A SOL2P37262 315 aa2.48□□□□□ -2.01
EFG1YGR271C-A GPI18P38211 433 aa2.48□□□□□ -2.01
EFG1YGR271C-A YHI9P38765 294 aa2.48□□□□□ -2.01
EFG1YGR271C-A SPL2P38839 148 aa2.48□□□□□ -2.01
EFG1YGR271C-A NVJ1P38881 321 aa2.48□□□□□ -2.01
EFG1YGR271C-A CIN5P40917 295 aa2.48□□□□□ -2.01
EFG1YGR271C-A FMP32P43557 207 aa2.48□□□□□ -2.01
EFG1YGR271C-A AIM25P47140 327 aa2.48□□□□□ -2.01
EFG1YGR271C-A VMA10P48836 114 aaKnown RBP2.48□□□□□ -2.01
EFG1YGR271C-A UBC12P52491 188 aa2.48□□□□□ -2.01
EFG1YGR271C-A PRM8P53174 237 aa2.48□□□□□ -2.01
EFG1YGR271C-A YGL034CP53186 121 aa2.48□□□□□ -2.01
EFG1YGR271C-A LSM7P53905 115 aaKnown RBP2.48□□□□□ -2.01
EFG1YGR271C-A PET191Q02772 108 aa2.48□□□□□ -2.01
EFG1YGR271C-A PLP1Q04004 230 aa2.48□□□□□ -2.01
EFG1YGR271C-A HNT1Q04344 158 aaKnown RBP2.48□□□□□ -2.01
EFG1YGR271C-A TAF2P23255 1407 aa2.48□□□□□ -2.01
EFG1YGR271C-A RPL25P04456 142 aaKnown RBP2.47□□□□□ -2.01
EFG1YGR271C-A SNF4P12904 322 aa2.47□□□□□ -2.01
EFG1YGR271C-A IDP1P21954 428 aaKnown RBP2.47□□□□□ -2.01
EFG1YGR271C-A SEC14P24280 304 aaKnown RBP2.47□□□□□ -2.01
EFG1YGR271C-A PHO89P38361 574 aa2.47□□□□□ -2.01
EFG1YGR271C-A BDH1P39714 382 aa2.47□□□□□ -2.01
EFG1YGR271C-A YIL012WP40551 113 aa2.47□□□□□ -2.01
EFG1YGR271C-A STB1P42845 420 aa2.47□□□□□ -2.01
EFG1YGR271C-A ERV29P53337 310 aa2.47□□□□□ -2.01
EFG1YGR271C-A MPA43P53583 542 aaPredicted RBP2.47□□□□□ -2.01
EFG1YGR271C-A RNH201P53942 307 aa2.47□□□□□ -2.01
EFG1YGR271C-A AIM34Q03673 198 aa2.47□□□□□ -2.01
EFG1YGR271C-A SPC24Q04477 213 aa2.47□□□□□ -2.01
EFG1YGR271C-A MSA1Q08471 629 aa2.47□□□□□ -2.01
EFG1YGR271C-A TRM10Q12400 293 aa2.47□□□□□ -2.01
EFG1YGR271C-A YBL008W-AQ3E821 79 aa2.47□□□□□ -2.01
EFG1YGR271C-A ECM5Q03214 1411 aa2.47□□□□□ -2.01
EFG1YGR271C-A EPT1P22140 391 aa2.46□□□□□ -2.02
EFG1YGR271C-A AHC2P25649 128 aa2.46□□□□□ -2.02
EFG1YGR271C-A BUB2P26448 306 aaPredicted RBP2.46□□□□□ -2.02
EFG1YGR271C-A ERG2P32352 222 aa2.46□□□□□ -2.02
EFG1YGR271C-A TCA17P32613 152 aa2.46□□□□□ -2.02
EFG1YGR271C-A SSH1P38353 490 aaKnown RBP2.46□□□□□ -2.02
EFG1YGR271C-A EDC2P40023 145 aaPredicted RBP2.46□□□□□ -2.02
EFG1YGR271C-A UFE1P41834 346 aa2.46□□□□□ -2.02
EFG1YGR271C-A PFS2P42841 465 aaKnown RBP2.46□□□□□ -2.02
EFG1YGR271C-A COQ5P49017 307 aa2.46□□□□□ -2.02
EFG1YGR271C-A YGL262WP53054 175 aa2.46□□□□□ -2.02
EFG1YGR271C-A FMP48P53233 369 aa2.46□□□□□ -2.02
EFG1YGR271C-A DID2P69771 204 aa2.46□□□□□ -2.02
EFG1YGR271C-A PKR1Q03880 122 aaKnown RBP2.46□□□□□ -2.02
EFG1YGR271C-A HPT1Q04178 221 aaKnown RBP2.46□□□□□ -2.02
EFG1YGR271C-A SUE1Q06524 206 aa2.46□□□□□ -2.02
EFG1YGR271C-A YPL257WQ08974 193 aa2.46□□□□□ -2.02
EFG1YGR271C-A BBP1Q12365 385 aa2.46□□□□□ -2.02
EFG1YGR271C-A MHT1Q12525 324 aa2.46□□□□□ -2.02
EFG1YGR271C-A RPL21BQ12672 160 aaKnown RBP2.46□□□□□ -2.02
EFG1YGR271C-A YOR1P53049 1477 aa2.45□□□□□ -2.02
EFG1YGR271C-A SIR2P06700 562 aa2.45□□□□□ -2.02
EFG1YGR271C-A SCO1P23833 295 aa2.45□□□□□ -2.02
EFG1YGR271C-A YCR023CP25351 611 aa2.45□□□□□ -2.02
EFG1YGR271C-A PTM1P32857 523 aa2.45□□□□□ -2.02
EFG1YGR271C-A DOG1P38774 246 aa2.45□□□□□ -2.02
EFG1YGR271C-A GGC1P38988 300 aa2.45□□□□□ -2.02
EFG1YGR271C-A HMF1P40037 129 aaKnown RBP2.45□□□□□ -2.02
EFG1YGR271C-A AVT6P40074 448 aa2.45□□□□□ -2.02
EFG1YGR271C-A CAT5P41735 233 aa2.45□□□□□ -2.02
EFG1YGR271C-A HSK3P69852 69 aa2.45□□□□□ -2.02
EFG1YGR271C-A SWP1Q02795 286 aa2.45□□□□□ -2.02
EFG1YGR271C-A YDR476CQ03362 224 aa2.45□□□□□ -2.02
EFG1YGR271C-A YOR376WQ08900 122 aa2.45□□□□□ -2.02
EFG1YGR271C-A YAL063C-AQ3E791 96 aa2.45□□□□□ -2.02
EFG1YGR271C-A YHR139C-AO13536 103 aa2.44□□□□□ -2.02
EFG1YGR271C-A IPP1P00817 287 aaKnown RBP2.44□□□□□ -2.02
EFG1YGR271C-A MAG1P22134 296 aaKnown RBP2.44□□□□□ -2.02
EFG1YGR271C-A YCR090CP25654 182 aaKnown RBP2.44□□□□□ -2.02
EFG1YGR271C-A ERG24P32462 438 aaKnown RBP2.44□□□□□ -2.02
EFG1YGR271C-A CSG2P35206 410 aa2.44□□□□□ -2.02
EFG1YGR271C-A SLM6P38343 150 aa2.44□□□□□ -2.02
EFG1YGR271C-A YHL044WP38727 235 aa2.44□□□□□ -2.02
EFG1YGR271C-A DOG2P38773 246 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms