RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W YGL235WP53071 178 aa3.7□□□□□ -1.82
LSB1YGR136W ERV29P53337 310 aa3.7□□□□□ -1.82
LSB1YGR136W OGG1P53397 376 aaPredicted RBP3.7□□□□□ -1.82
LSB1YGR136W PGA1P53896 198 aa3.7□□□□□ -1.82
LSB1YGR136W NUP53Q03790 475 aa3.7□□□□□ -1.82
LSB1YGR136W CAC2Q04199 468 aa3.7□□□□□ -1.82
LSB1YGR136W YOL024WQ08172 172 aa3.7□□□□□ -1.82
LSB1YGR136W VMA9Q3E7B6 73 aa3.7□□□□□ -1.82
LSB1YGR136W TRA1P38811 3744 aa3.7□□□□□ -1.82
LSB1YGR136W YSF3P0C074 85 aaPredicted RBP3.69□□□□□ -1.82
LSB1YGR136W AQY1P0CD91 305 aa3.69□□□□□ -1.82
LSB1YGR136W RPL20AP0CX23 172 aaKnown RBP3.69□□□□□ -1.82
LSB1YGR136W RPL20BP0CX24 172 aaPredicted RBP3.69□□□□□ -1.82
LSB1YGR136W ERD1P16151 362 aa3.69□□□□□ -1.82
LSB1YGR136W ERD2P18414 219 aa3.69□□□□□ -1.82
LSB1YGR136W YPK2P18961 677 aa3.69□□□□□ -1.82
LSB1YGR136W NUP1P20676 1076 aa3.69□□□□□ -1.82
LSB1YGR136W SEC62P21825 274 aa3.69□□□□□ -1.82
LSB1YGR136W EXG1P23776 448 aaKnown RBP3.69□□□□□ -1.82
LSB1YGR136W RNA15P25299 296 aaPredicted RBP3.69□□□□□ -1.82
LSB1YGR136W STE50P25344 346 aa3.69□□□□□ -1.82
LSB1YGR136W HOM6P31116 359 aaKnown RBP3.69□□□□□ -1.82
LSB1YGR136W TRS65P32893 560 aa3.69□□□□□ -1.82
LSB1YGR136W MDL1P33310 695 aa3.69□□□□□ -1.82
LSB1YGR136W GPX1P36014 167 aa3.69□□□□□ -1.82
LSB1YGR136W SHE2P36068 246 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
LSB1YGR136W YKL071WP36086 256 aa3.69□□□□□ -1.82
LSB1YGR136W ICS2P38284 255 aa3.69□□□□□ -1.82
LSB1YGR136W CUP9P41817 306 aa3.69□□□□□ -1.82
LSB1YGR136W HXT14P42833 540 aa3.69□□□□□ -1.82
LSB1YGR136W TAD2P47058 250 aa3.69□□□□□ -1.82
LSB1YGR136W ADO1P47143 340 aaKnown RBP3.69□□□□□ -1.82
LSB1YGR136W LCL3P53153 274 aa3.69□□□□□ -1.82
LSB1YGR136W PKP2P53170 491 aa3.69□□□□□ -1.82
LSB1YGR136W PAU12P53343 120 aa3.69□□□□□ -1.82
LSB1YGR136W YLR460CP54007 376 aa3.69□□□□□ -1.82
LSB1YGR136W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
LSB1YGR136W NCE101Q02820 53 aa3.69□□□□□ -1.82
LSB1YGR136W INP1Q03694 420 aa3.69□□□□□ -1.82
LSB1YGR136W RUB1Q03919 77 aa3.69□□□□□ -1.82
LSB1YGR136W TPO3Q06451 622 aa3.69□□□□□ -1.82
LSB1YGR136W FRE6Q12473 712 aa3.69□□□□□ -1.82
LSB1YGR136W KIN28P06242 306 aa3.68□□□□□ -1.82
LSB1YGR136W COX9P07255 59 aa3.68□□□□□ -1.82
LSB1YGR136W MATALPHA1P0CY06 175 aa3.68□□□□□ -1.82
LSB1YGR136W HMLALPHA1P0CY07 175 aa3.68□□□□□ -1.82
LSB1YGR136W GPI12P23797 304 aa3.68□□□□□ -1.82
LSB1YGR136W RNA14P25298 677 aaKnown RBP3.68□□□□□ -1.82
LSB1YGR136W FUN19P28003 413 aaPredicted RBP3.68□□□□□ -1.82
LSB1YGR136W YEF1P32622 495 aa3.68□□□□□ -1.82
LSB1YGR136W MSN4P33749 630 aa3.68□□□□□ -1.82
LSB1YGR136W TMA19P35691 167 aaKnown RBP3.68□□□□□ -1.82
LSB1YGR136W THI2P38141 450 aa3.68□□□□□ -1.82
LSB1YGR136W PAU24P38155 120 aa3.68□□□□□ -1.82
LSB1YGR136W ATG8P38182 117 aaRIP-Chip data3.68□□□□□ -1.82not detected
LSB1YGR136W YBR013CP38215 129 aa3.68□□□□□ -1.82
LSB1YGR136W SFH5P47008 294 aa3.68□□□□□ -1.82
LSB1YGR136W UBP8P50102 471 aa3.68□□□□□ -1.82
LSB1YGR136W YGL159WP53110 370 aa3.68□□□□□ -1.82
LSB1YGR136W ANT1Q06497 328 aa3.68□□□□□ -1.82
LSB1YGR136W MCH4Q08268 501 aa3.68□□□□□ -1.82
LSB1YGR136W RLM1Q12224 676 aa3.68□□□□□ -1.82
LSB1YGR136W AGC1Q12482 902 aa3.68□□□□□ -1.82
LSB1YGR136W YPR145C-AQ2V2P0 78 aa3.68□□□□□ -1.82
LSB1YGR136W YLR099W-AQ3E798 87 aa3.68□□□□□ -1.82
LSB1YGR136W HTB1P02293 131 aaKnown RBP3.67□□□□□ -1.82
LSB1YGR136W HTB2P02294 131 aa3.67□□□□□ -1.82
LSB1YGR136W NAM2P11325 894 aa3.67□□□□□ -1.82
LSB1YGR136W FUN14P18411 198 aa3.67□□□□□ -1.82
LSB1YGR136W PUT3P25502 979 aaPredicted RBP3.67□□□□□ -1.82
LSB1YGR136W STP22P25604 385 aa3.67□□□□□ -1.82
LSB1YGR136W DEG1P31115 442 aaKnown RBP3.67□□□□□ -1.82
LSB1YGR136W AIM29P36154 155 aa3.67□□□□□ -1.82
LSB1YGR136W PHO90P39535 881 aa3.67□□□□□ -1.82
LSB1YGR136W RFC4P40339 323 aaKnown RBP3.67□□□□□ -1.82
LSB1YGR136W BMT5P40493 336 aa3.67□□□□□ -1.82
LSB1YGR136W SGN1P40561 250 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
LSB1YGR136W SNO3P43544 222 aa3.67□□□□□ -1.82
LSB1YGR136W LOH1P47055 219 aa3.67□□□□□ -1.82
LSB1YGR136W CCC1P47818 322 aa3.67□□□□□ -1.82
LSB1YGR136W PHB2P50085 310 aa3.67□□□□□ -1.82
LSB1YGR136W YGL260WP53056 76 aa3.67□□□□□ -1.82
LSB1YGR136W VOA1P53262 265 aa3.67□□□□□ -1.82
LSB1YGR136W MPP6P53725 186 aaPredicted RBP3.67□□□□□ -1.82
LSB1YGR136W RHO5P53879 331 aaKnown RBP3.67□□□□□ -1.82
LSB1YGR136W SNO1Q03144 224 aa3.67□□□□□ -1.82
LSB1YGR136W MSS11Q03825 758 aa3.67□□□□□ -1.82
LSB1YGR136W MRPL1Q04599 285 aa3.67□□□□□ -1.82
LSB1YGR136W DCR2Q05924 578 aa3.67□□□□□ -1.82
LSB1YGR136W MRPL51Q06090 140 aaPredicted RBP3.67□□□□□ -1.82
LSB1YGR136W MRPL35Q06678 367 aa3.67□□□□□ -1.82
LSB1YGR136W SSK1Q07084 712 aa3.67□□□□□ -1.82
LSB1YGR136W COQ10Q08058 207 aa3.67□□□□□ -1.82
LSB1YGR136W RAD28Q12021 506 aa3.67□□□□□ -1.82
LSB1YGR136W MCP1Q12106 302 aa3.67□□□□□ -1.82
LSB1YGR136W EAF3Q12432 401 aa3.67□□□□□ -1.82
LSB1YGR136W PAR32Q12515 295 aaKnown RBP3.67□□□□□ -1.82
LSB1YGR136W YBR056W-AI2HB52 66 aa3.66□□□□□ -1.82
LSB1YGR136W RPL31AP0C2H8 113 aaKnown RBP3.66□□□□□ -1.82
LSB1YGR136W RPL31BP0C2H9 113 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 190.4 ms