RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W ERV29P53337 310 aa1.57□□□□□ -2.16
RSM28YDR494W ABF2Q02486 183 aa1.57□□□□□ -2.16
RSM28YDR494W CFT1Q06632 1357 aaKnown RBP1.57□□□□□ -2.16
RSM28YDR494W CDC8P00572 216 aa1.56□□□□□ -2.16
RSM28YDR494W RPO26P20435 155 aa1.56□□□□□ -2.16
RSM28YDR494W CDC10P25342 322 aaKnown RBP1.56□□□□□ -2.16
RSM28YDR494W RSM25P40496 264 aa1.56□□□□□ -2.16
RSM28YDR494W YJR149WP47177 404 aa1.56□□□□□ -2.16
RSM28YDR494W YMD8Q03697 442 aa1.56□□□□□ -2.16
RSM28YDR494W YLR283WQ05867 314 aa1.56□□□□□ -2.16
RSM28YDR494W TPO4Q12256 659 aa1.56□□□□□ -2.16
RSM28YDR494W YHR139C-AO13536 103 aa1.55□□□□□ -2.16
RSM28YDR494W YPR170W-BP0C5R9 85 aa1.55□□□□□ -2.16
RSM28YDR494W DDI2P0CH63 225 aa1.55□□□□□ -2.16
RSM28YDR494W DDI3P0CH64 225 aa1.55□□□□□ -2.16
RSM28YDR494W MATALPHA1P0CY06 175 aa1.55□□□□□ -2.16
RSM28YDR494W HMLALPHA1P0CY07 175 aa1.55□□□□□ -2.16
RSM28YDR494W PEX17P40155 199 aa1.55□□□□□ -2.16
RSM28YDR494W YML108WQ03759 105 aa1.55□□□□□ -2.16
RSM28YDR494W DCN1Q12395 269 aa1.55□□□□□ -2.16
RSM28YDR494W BCY1P07278 416 aaKnown RBP1.54□□□□□ -2.16
RSM28YDR494W NTF2P33331 125 aaKnown RBP1.54□□□□□ -2.16
RSM28YDR494W AGE2P40529 298 aa1.54□□□□□ -2.16
RSM28YDR494W TOS8P53147 276 aa1.54□□□□□ -2.16
RSM28YDR494W YOL162WP0CF19 215 aa1.53□□□□□ -2.16
RSM28YDR494W PET9P18239 318 aaKnown RBP1.53□□□□□ -2.16
RSM28YDR494W VPS21P36017 210 aaKnown RBP1.53□□□□□ -2.16
RSM28YDR494W RPL33BP41056 107 aaKnown RBP1.53□□□□□ -2.16
RSM28YDR494W LIA1P47120 325 aaKnown RBP1.53□□□□□ -2.16
RSM28YDR494W YNR062CP53748 327 aa1.53□□□□□ -2.16
RSM28YDR494W DRS2P39524 1355 aa1.52□□□□□ -2.17
RSM28YDR494W YER135CP40082 130 aa1.52□□□□□ -2.17
RSM28YDR494W COX15P40086 486 aa1.52□□□□□ -2.17
RSM28YDR494W PRE6P40303 254 aaKnown RBP1.52□□□□□ -2.17
RSM28YDR494W RPC17P47076 161 aa1.52□□□□□ -2.17
RSM28YDR494W NOP13P53883 403 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
RSM28YDR494W BUD25P85052 153 aa1.52□□□□□ -2.17
RSM28YDR494W PSF1Q12488 208 aa1.52□□□□□ -2.17
RSM28YDR494W LSO2Q3E772 92 aaKnown RBP1.52□□□□□ -2.17
RSM28YDR494W SPT3P06844 337 aa1.51□□□□□ -2.17
RSM28YDR494W YKR045CP36138 183 aa1.51□□□□□ -2.17
RSM28YDR494W YBR219CP38317 127 aa1.51□□□□□ -2.17
RSM28YDR494W DOG2P38773 246 aa1.51□□□□□ -2.17
RSM28YDR494W SVP26P38869 228 aa1.51□□□□□ -2.17
RSM28YDR494W AVT2P39981 480 aa1.51□□□□□ -2.17
RSM28YDR494W YNL010WP53981 241 aaKnown RBP1.51□□□□□ -2.17
RSM28YDR494W DID2P69771 204 aa1.51□□□□□ -2.17
RSM28YDR494W TRM12Q04235 462 aa1.51□□□□□ -2.17
RSM28YDR494W URA6P15700 204 aa1.5□□□□□ -2.17
RSM28YDR494W ATG22P25568 528 aa1.5□□□□□ -2.17
RSM28YDR494W MEI4P29467 408 aa1.5□□□□□ -2.17
RSM28YDR494W SSO1P32867 290 aa1.5□□□□□ -2.17
RSM28YDR494W IRC22P40006 225 aa1.5□□□□□ -2.17
RSM28YDR494W YER085CP40058 173 aa1.5□□□□□ -2.17
RSM28YDR494W PGD1P40356 397 aa1.5□□□□□ -2.17
RSM28YDR494W ICE2P40499 491 aa1.5□□□□□ -2.17
RSM28YDR494W TIR3P40552 269 aa1.5□□□□□ -2.17
RSM28YDR494W AIF1P52923 378 aa1.5□□□□□ -2.17
RSM28YDR494W FYV6P53913 173 aa1.5□□□□□ -2.17
RSM28YDR494W LPP1Q04396 274 aa1.5□□□□□ -2.17
RSM28YDR494W SPG3Q04398 127 aaPredicted RBP1.5□□□□□ -2.17
RSM28YDR494W SML1Q04964 104 aa1.5□□□□□ -2.17
RSM28YDR494W CDC123Q05791 360 aa1.5□□□□□ -2.17
RSM28YDR494W RHO1P06780 209 aaKnown RBP1.49□□□□□ -2.17
RSM28YDR494W RPL24BP24000 155 aaKnown RBP1.49□□□□□ -2.17
RSM28YDR494W URA8P38627 578 aaPredicted RBP1.49□□□□□ -2.17
RSM28YDR494W SNZ1Q03148 297 aa1.49□□□□□ -2.17
RSM28YDR494W FLO9P39712 1322 aa1.48□□□□□ -2.17
RSM28YDR494W CDC28P00546 298 aaKnown RBP1.48□□□□□ -2.17
RSM28YDR494W MRPS28P21771 286 aa1.48□□□□□ -2.17
RSM28YDR494W VMA6P32366 345 aaKnown RBP1.48□□□□□ -2.17
RSM28YDR494W SRY1P36007 326 aa1.48□□□□□ -2.17
RSM28YDR494W MIC12P38341 106 aa1.48□□□□□ -2.17
RSM28YDR494W MIC26P50087 233 aa1.48□□□□□ -2.17
RSM28YDR494W THP2O13539 261 aaKnown RBP1.47□□□□□ -2.17
RSM28YDR494W REP2P03872 296 aa1.47□□□□□ -2.17
RSM28YDR494W YLR156WP0CE96 114 aa1.47□□□□□ -2.17
RSM28YDR494W YLR159WP0CE97 114 aa1.47□□□□□ -2.17
RSM28YDR494W YLR161WP0CE98 114 aa1.47□□□□□ -2.17
RSM28YDR494W YMR31P19955 123 aa1.47□□□□□ -2.17
RSM28YDR494W PPA2P28239 310 aa1.47□□□□□ -2.17
RSM28YDR494W POP4P38336 279 aa1.47□□□□□ -2.17
RSM28YDR494W YNL217WP40152 326 aa1.47□□□□□ -2.17
RSM28YDR494W BRR6P53062 197 aa1.47□□□□□ -2.17
RSM28YDR494W BOL2P53082 120 aa1.47□□□□□ -2.17
RSM28YDR494W PRM8P53174 237 aa1.47□□□□□ -2.17
RSM28YDR494W ALG13P53178 202 aa1.47□□□□□ -2.17
RSM28YDR494W CSI2Q08054 341 aa1.47□□□□□ -2.17
RSM28YDR494W RPL28P02406 149 aaKnown RBP1.46□□□□□ -2.18
RSM28YDR494W RPL27BP0C2H7 136 aaKnown RBP1.46□□□□□ -2.18
RSM28YDR494W YGL010WP25338 174 aa1.46□□□□□ -2.18
RSM28YDR494W BMH2P34730 273 aaKnown RBP1.46□□□□□ -2.18
RSM28YDR494W MRPL28P36527 147 aa1.46□□□□□ -2.18
RSM28YDR494W BXI1P48558 297 aa1.46□□□□□ -2.18
RSM28YDR494W YDR248CQ03786 193 aa1.46□□□□□ -2.18
RSM28YDR494W TDA8Q6B2U8 126 aa1.46□□□□□ -2.18
RSM28YDR494W UBR2Q07963 1872 aa1.46□□□□□ -2.18
RSM28YDR494W DBF2P22204 572 aa1.45□□□□□ -2.18
RSM28YDR494W FZF1P32805 299 aa1.45□□□□□ -2.18
RSM28YDR494W YRB2P40517 327 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms