RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	AGC1	Q12482	902 aa		3.81	□□□□□ -1.8
RPN5	YDL147W	YPT52	P36018	234 aa	Known RBP	3.8	□□□□□ -1.8
RPN5	YDL147W	YCR087C-A	P37263	153 aa		3.8	□□□□□ -1.8
RPN5	YDL147W	NOP19	P53317	196 aa	Predicted RBP	3.8	□□□□□ -1.8
RPN5	YDL147W	SNZ1	Q03148	297 aa		3.8	□□□□□ -1.8
RPN5	YDL147W	PRM7	Q12459	698 aa		3.8	□□□□□ -1.8
RPN5	YDL147W	FCY2	P17064	533 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	OAC1	P32332	324 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	DOG2	P38773	246 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	DOG1	P38774	246 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	RPF1	P38805	295 aa	Known RBP	3.79	□□□□□ -1.8
RPN5	YDL147W	ARC15	P40518	154 aa	RIP-Chip data	3.79	□□□□□ -1.8	not detected
RPN5	YDL147W	YGL088W	P53151	121 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	PRM8	P53174	237 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	GRH1	Q04410	372 aa	Known RBP	3.79	□□□□□ -1.8
RPN5	YDL147W	FEX1	Q08913	375 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	NIP7	Q08962	181 aa	Known RBP	3.79	□□□□□ -1.8
RPN5	YDL147W	FEX2	Q08991	375 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	SAS5	Q99314	248 aa		3.79	□□□□□ -1.8
RPN5	YDL147W	QCR7	P00128	127 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	ASF2	P32448	525 aa	Predicted RBP	3.78	□□□□□ -1.8
RPN5	YDL147W	APS1	P35181	156 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	YBR063C	P38083	404 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
RPN5	YDL147W	YAR068W	P39564	161 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	HOP2	P53187	214 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	SYF2	P53277	215 aa	Predicted RBP	3.78	□□□□□ -1.8
RPN5	YDL147W	DID2	P69771	204 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	RSM10	Q03201	203 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	YMR279C	Q03263	540 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	YOR268C	Q08734	132 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	YCL012C	Q8J0M4	134 aa		3.78	□□□□□ -1.8
RPN5	YDL147W	SPS18	P32572	300 aa		3.77	□□□□□ -1.81
RPN5	YDL147W	YKR032W	P36127	104 aa		3.77	□□□□□ -1.81
RPN5	YDL147W	PIR5	P46999	287 aa		3.77	□□□□□ -1.81
RPN5	YDL147W	YJL016W	P47072	561 aa		3.77	□□□□□ -1.81
RPN5	YDL147W	ATG39	Q06159	398 aa		3.77	□□□□□ -1.81
RPN5	YDL147W	YPR096C	O13587	100 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	KRE1	P17260	313 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	APA2	P22108	325 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	YHR125W	P38831	101 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	YER084W	P40057	128 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	TIF34	P40217	347 aa	Known RBP	3.76	□□□□□ -1.81
RPN5	YDL147W	PEX12	Q04370	399 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	CDD1	Q06549	142 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	MDM32	Q12171	622 aa		3.76	□□□□□ -1.81
RPN5	YDL147W	YHR139C-A	O13536	103 aa		3.75	□□□□□ -1.81
RPN5	YDL147W	YER188W	P40103	239 aa		3.75	□□□□□ -1.81
RPN5	YDL147W	YJR056C	P47115	236 aa		3.75	□□□□□ -1.81
RPN5	YDL147W	Q0255	P03881	472 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	MIG1	P27705	504 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	ATP7	P30902	174 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	VMA11	P32842	164 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	YIL001W	P40560	513 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	RPA43	P46669	326 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	MMS2	P53152	137 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	YGR026W	P53217	278 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	GPM2	Q12008	311 aa		3.74	□□□□□ -1.81
RPN5	YDL147W	YPR170W-B	P0C5R9	85 aa		3.73	□□□□□ -1.81
RPN5	YDL147W	DPM1	P14020	267 aa	Known RBP	3.73	□□□□□ -1.81
RPN5	YDL147W	MRPL28	P36527	147 aa		3.73	□□□□□ -1.81
RPN5	YDL147W	RMD6	P39975	231 aa		3.73	□□□□□ -1.81
RPN5	YDL147W	CCA1	P21269	546 aa		3.72	□□□□□ -1.81
RPN5	YDL147W	ECM33	P38248	429 aa	Known RBP	3.72	□□□□□ -1.81
RPN5	YDL147W	COG3	P40094	801 aa		3.72	□□□□□ -1.81
RPN5	YDL147W	RSM25	P40496	264 aa		3.72	□□□□□ -1.81
RPN5	YDL147W	LPP1	Q04396	274 aa		3.72	□□□□□ -1.81
RPN5	YDL147W	RPL25	P04456	142 aa	Known RBP	3.71	□□□□□ -1.81
RPN5	YDL147W	ATG22	P25568	528 aa		3.71	□□□□□ -1.81
RPN5	YDL147W	ADE1	P27616	306 aa		3.71	□□□□□ -1.81
RPN5	YDL147W	YJL144W	P47009	104 aa		3.71	□□□□□ -1.81
RPN5	YDL147W	SSU72	P53538	206 aa	Predicted RBP	3.71	□□□□□ -1.81
RPN5	YDL147W	TDA8	Q6B2U8	126 aa		3.71	□□□□□ -1.81
RPN5	YDL147W	FKS1	P38631	1876 aa	Known RBP	3.71	□□□□□ -1.82
RPN5	YDL147W	YHR032W-A	P0C5N6	59 aa		3.7	□□□□□ -1.82
RPN5	YDL147W	SKG1	P36169	355 aa		3.7	□□□□□ -1.82
RPN5	YDL147W	SEC72	P39742	193 aa	Known RBP	3.7	□□□□□ -1.82
RPN5	YDL147W	IRC22	P40006	225 aa		3.7	□□□□□ -1.82
RPN5	YDL147W	SPO73	P40031	143 aa		3.7	□□□□□ -1.82
RPN5	YDL147W	LSM7	P53905	115 aa	Known RBP	3.7	□□□□□ -1.82
RPN5	YDL147W	YNL010W	P53981	241 aa	Known RBP	3.7	□□□□□ -1.82
RPN5	YDL147W	AST2	P39945	430 aa	Known RBP	3.69	□□□□□ -1.82
RPN5	YDL147W	AKR2	Q12013	749 aa		3.69	□□□□□ -1.82
RPN5	YDL147W	RPL9A	P05738	191 aa	Known RBP	3.68	□□□□□ -1.82
RPN5	YDL147W	SEC4	P07560	215 aa	Known RBP	3.68	□□□□□ -1.82
RPN5	YDL147W	SCM4	P32564	187 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	TCA17	P32613	152 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	CAF4	P36130	643 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	SDH4	P37298	181 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	POP4	P38336	279 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	YHL026C	P38740	315 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	EGD2	P38879	174 aa	Known RBP	3.68	□□□□□ -1.82
RPN5	YDL147W	RPL9B	P51401	191 aa	Known RBP	3.68	□□□□□ -1.82
RPN5	YDL147W	DIA1	P54005	336 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	PET191	Q02772	108 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	GAS3	Q03655	524 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	YNG1	Q08465	219 aa		3.68	□□□□□ -1.82
RPN5	YDL147W	CLP1	Q08685	445 aa	Predicted RBP	3.68	□□□□□ -1.82
RPN5	YDL147W	RPL26A	P05743	127 aa	Known RBP	3.67	□□□□□ -1.82
RPN5	YDL147W	CDC7	P06243	507 aa		3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms