RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C TAD2P47058 250 aa4.54□□□□□ -1.68
ATG20YDL113C YDR248CQ03786 193 aa4.54□□□□□ -1.68
ATG20YDL113C THI72Q08579 599 aa4.54□□□□□ -1.68
ATG20YDL113C EAF3Q12432 401 aa4.54□□□□□ -1.68
ATG20YDL113C TFB5Q3E7C1 72 aaPredicted RBP4.54□□□□□ -1.68
ATG20YDL113C YOR032W-AQ8TGS1 66 aa4.54□□□□□ -1.68
ATG20YDL113C Q0144Q9ZZW2 109 aa4.54□□□□□ -1.68
ATG20YDL113C YCR016WP25617 290 aaKnown RBP4.53□□□□□ -1.68
ATG20YDL113C FMT1P32785 401 aa4.53□□□□□ -1.68
ATG20YDL113C PPZ2P33329 710 aa4.53□□□□□ -1.68
ATG20YDL113C ARO9P38840 513 aaPredicted RBP4.53□□□□□ -1.68
ATG20YDL113C IDP2P41939 412 aa4.53□□□□□ -1.68
ATG20YDL113C GLO1P50107 326 aa4.53□□□□□ -1.68
ATG20YDL113C AVT4P50944 713 aa4.53□□□□□ -1.68
ATG20YDL113C PET20Q99373 253 aa4.53□□□□□ -1.68
ATG20YDL113C YLR358CO13565 187 aa4.52□□□□□ -1.69
ATG20YDL113C TPI1P00942 248 aaKnown RBP4.52□□□□□ -1.69
ATG20YDL113C SEC22P22214 214 aa4.52□□□□□ -1.69
ATG20YDL113C MTC6P38849 526 aa4.52□□□□□ -1.69
ATG20YDL113C BFR1P38934 470 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
ATG20YDL113C PTI1P39927 425 aaPredicted RBP4.52□□□□□ -1.69
ATG20YDL113C URM1P40554 99 aaPredicted RBP4.52□□□□□ -1.69
ATG20YDL113C UFD1P53044 361 aa4.52□□□□□ -1.69
ATG20YDL113C DIG2Q03373 323 aaKnown RBP4.52□□□□□ -1.69
ATG20YDL113C GRE1Q08969 168 aa4.52□□□□□ -1.69
ATG20YDL113C NCE102Q12207 173 aaRIP-Chip data4.52□□□□□ -1.69not detected
ATG20YDL113C ATP14Q12349 124 aa4.52□□□□□ -1.69
ATG20YDL113C HUT1Q12520 339 aa4.52□□□□□ -1.69
ATG20YDL113C YLR415CO13578 112 aa4.52□□□□□ -1.69
ATG20YDL113C STF1P01098 86 aa4.52□□□□□ -1.69
ATG20YDL113C PUT1P09368 476 aa4.52□□□□□ -1.69
ATG20YDL113C NAM2P11325 894 aa4.52□□□□□ -1.69
ATG20YDL113C RPL30P14120 105 aaKnown RBP4.52□□□□□ -1.69
ATG20YDL113C ARO3P14843 370 aaKnown RBP4.52□□□□□ -1.69
ATG20YDL113C SER3P40054 469 aa4.52□□□□□ -1.69
ATG20YDL113C GET2P40056 285 aa4.52□□□□□ -1.69
ATG20YDL113C YIR035CP40579 254 aa4.52□□□□□ -1.69
ATG20YDL113C ALG9P53868 555 aaKnown RBP4.52□□□□□ -1.69
ATG20YDL113C RSM23Q01163 450 aa4.52□□□□□ -1.69
ATG20YDL113C SYM1Q06563 197 aa4.52□□□□□ -1.69
ATG20YDL113C RRT7Q07829 113 aa4.52□□□□□ -1.69
ATG20YDL113C POM34Q12445 299 aa4.52□□□□□ -1.69
ATG20YDL113C PRM4Q12498 284 aa4.52□□□□□ -1.69
ATG20YDL113C YJR011CP47086 261 aaPredicted RBP4.51□□□□□ -1.69
ATG20YDL113C COX18P53239 316 aa4.51□□□□□ -1.69
ATG20YDL113C PCP1P53259 346 aa4.51□□□□□ -1.69
ATG20YDL113C YNR048WP53740 393 aa4.51□□□□□ -1.69
ATG20YDL113C ERV25P54837 211 aaKnown RBP4.51□□□□□ -1.69
ATG20YDL113C YAP6Q03935 383 aa4.51□□□□□ -1.69
ATG20YDL113C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
ATG20YDL113C YDL180WQ12301 547 aa4.51□□□□□ -1.69
ATG20YDL113C TFC7Q12415 435 aa4.51□□□□□ -1.69
ATG20YDL113C YBR085C-AO43137 85 aa4.5□□□□□ -1.69
ATG20YDL113C TDH3P00359 332 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
ATG20YDL113C CBP6P07253 162 aaPredicted RBP4.5□□□□□ -1.69
ATG20YDL113C RIP1P08067 215 aa4.5□□□□□ -1.69
ATG20YDL113C LDB16P25587 256 aa4.5□□□□□ -1.69
ATG20YDL113C MRPS5P33759 307 aa4.5□□□□□ -1.69
ATG20YDL113C SSO2P39926 295 aa4.5□□□□□ -1.69
ATG20YDL113C NSA1P53136 463 aaPredicted RBP4.5□□□□□ -1.69
ATG20YDL113C CAB5Q03941 241 aa4.5□□□□□ -1.69
ATG20YDL113C YDR387CQ04162 555 aa4.5□□□□□ -1.69
ATG20YDL113C RTT103Q05543 409 aa4.5□□□□□ -1.69
ATG20YDL113C CDC28P00546 298 aaKnown RBP4.5□□□□□ -1.69
ATG20YDL113C MSI1P13712 422 aa4.5□□□□□ -1.69
ATG20YDL113C CPR4P25334 318 aa4.5□□□□□ -1.69
ATG20YDL113C RFA3P26755 122 aaKnown RBP4.5□□□□□ -1.69
ATG20YDL113C PTC7P38797 343 aa4.5□□□□□ -1.69
ATG20YDL113C YMR144WP40214 342 aaKnown RBP4.5□□□□□ -1.69
ATG20YDL113C SGN1P40561 250 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
ATG20YDL113C MOB2P43563 287 aa4.5□□□□□ -1.69
ATG20YDL113C GNA1P43577 159 aaPredicted RBP4.5□□□□□ -1.69
ATG20YDL113C NIF3P53081 288 aa4.5□□□□□ -1.69
ATG20YDL113C ANT1Q06497 328 aa4.5□□□□□ -1.69
ATG20YDL113C ARR3Q06598 404 aa4.5□□□□□ -1.69
ATG20YDL113C SCP1Q08873 200 aa4.5□□□□□ -1.69
ATG20YDL113C MRS4P23500 304 aa4.49□□□□□ -1.69
ATG20YDL113C DEG1P31115 442 aaKnown RBP4.49□□□□□ -1.69
ATG20YDL113C PDC2P32896 925 aa4.49□□□□□ -1.69
ATG20YDL113C FLX1P40464 311 aa4.49□□□□□ -1.69
ATG20YDL113C BMT5P40493 336 aa4.49□□□□□ -1.69
ATG20YDL113C LSM1P47017 172 aaKnown RBP4.49□□□□□ -1.69
ATG20YDL113C YGL117WP53133 265 aa4.49□□□□□ -1.69
ATG20YDL113C TIM44Q01852 431 aa4.49□□□□□ -1.69
ATG20YDL113C YPL077CQ02831 240 aa4.49□□□□□ -1.69
ATG20YDL113C YPL108WQ02872 168 aaPredicted RBP4.49□□□□□ -1.69
ATG20YDL113C TSA2Q04120 196 aa4.49□□□□□ -1.69
ATG20YDL113C MRX9Q07349 420 aaKnown RBP4.49□□□□□ -1.69
ATG20YDL113C RNH203Q12338 110 aa4.49□□□□□ -1.69
ATG20YDL113C IZH2Q12442 317 aa4.49□□□□□ -1.69
ATG20YDL113C UBA3Q99344 299 aa4.49□□□□□ -1.69
ATG20YDL113C CDC39P25655 2108 aaKnown RBP4.49□□□□□ -1.69
ATG20YDL113C ERV1P27882 189 aa4.48□□□□□ -1.69
ATG20YDL113C TRR1P29509 319 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C REC114P32841 428 aa4.48□□□□□ -1.69
ATG20YDL113C MCH2P36032 473 aa4.48□□□□□ -1.69
ATG20YDL113C YER079WP40052 210 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C PCL7P40186 285 aa4.48□□□□□ -1.69
ATG20YDL113C SWM2P40342 146 aa4.48□□□□□ -1.69
ATG20YDL113C TEX1P53851 422 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms