RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	YJL016W	P47072	561 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	YJR056C	P47115	236 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	MIG2	P53035	382 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	GTR2	P53290	341 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	YMD8	Q03697	442 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	GRH1	Q04410	372 aa	Known RBP	2.22	□□□□□ -2.05
AIM4	YBR194W	GIM5	Q04493	163 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	YNG1	Q08465	219 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	YPL257W	Q08974	193 aa		2.22	□□□□□ -2.05
AIM4	YBR194W	NOT5	Q12514	560 aa	Predicted RBP	2.22	□□□□□ -2.05
AIM4	YBR194W	ADH3	P07246	375 aa	Known RBP	2.21	□□□□□ -2.06
AIM4	YBR194W	SEC4	P07560	215 aa	Known RBP	2.21	□□□□□ -2.06
AIM4	YBR194W	SNF6	P18888	332 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	ERG24	P32462	438 aa	Known RBP	2.21	□□□□□ -2.06
AIM4	YBR194W	SPS18	P32572	300 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	RPF1	P38805	295 aa	Known RBP	2.21	□□□□□ -2.06
AIM4	YBR194W	MDM34	P53083	459 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	YGL159W	P53110	370 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	RTC4	P53850	401 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	FCF1	Q05498	189 aa	Predicted RBP	2.21	□□□□□ -2.06
AIM4	YBR194W	YLR030W	Q07967	263 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	MSA1	Q08471	629 aa		2.21	□□□□□ -2.06
AIM4	YBR194W	SGA1	P08019	549 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	FBA1	P14540	359 aa	Known RBP	2.2	□□□□□ -2.06
AIM4	YBR194W	OAC1	P32332	324 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	TCA17	P32613	152 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	RCN1	P36054	211 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	ECM33	P38248	429 aa	Known RBP	2.2	□□□□□ -2.06
AIM4	YBR194W	DOG2	P38773	246 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	DOG1	P38774	246 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	POG1	P40473	351 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	FIS1	P40515	155 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	RPA43	P46669	326 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	YLR179C	Q06252	201 aa	Known RBP	2.2	□□□□□ -2.06
AIM4	YBR194W	CDD1	Q06549	142 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	MDM32	Q12171	622 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	GEP5	Q12393	293 aa		2.2	□□□□□ -2.06
AIM4	YBR194W	HIS3	P06633	220 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	RPL35A	P0CX84	120 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	RPL35B	P0CX85	120 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	MAG1	P22134	296 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	YGP1	P38616	354 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	ERG10	P41338	398 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	OST2	P46964	130 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	LSM7	P53905	115 aa	Known RBP	2.19	□□□□□ -2.06
AIM4	YBR194W	YDR114C	Q04597	100 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	FUS2	Q05670	677 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	BBP1	Q12365	385 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	AGC1	Q12482	902 aa		2.19	□□□□□ -2.06
AIM4	YBR194W	RPL25	P04456	142 aa	Known RBP	2.18	□□□□□ -2.06
AIM4	YBR194W	DSF1	P0CX08	502 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	YNR073C	P0CX09	502 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	FCY2	P17064	533 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	TRR1	P29509	319 aa	Known RBP	2.18	□□□□□ -2.06
AIM4	YBR194W	MSA2	P36157	363 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	YAR068W	P39564	161 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	RMD6	P39975	231 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	COG3	P40094	801 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	ARC15	P40518	154 aa	RIP-Chip data	2.18	□□□□□ -2.06	not detected
AIM4	YBR194W	YIL059C	P40520	121 aa		2.18	□□□□□ -2.06
AIM4	YBR194W	EFM5	P53200	248 aa	Known RBP	2.18	□□□□□ -2.06
AIM4	YBR194W	SMD2	Q06217	110 aa	Known RBP	2.18	□□□□□ -2.06
AIM4	YBR194W	NIP7	Q08962	181 aa	Known RBP	2.18	□□□□□ -2.06
AIM4	YBR194W	YHR139C-A	O13536	103 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	RAD10	P06838	210 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	YBR063C	P38083	404 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	IRC22	P40006	225 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	HMF1	P40037	129 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	TIF34	P40217	347 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	PFS2	P42841	465 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	YGR026W	P53217	278 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	YNL010W	P53981	241 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	RSM10	Q03201	203 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	LPP1	Q04396	274 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	YLR036C	Q07986	203 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	IES4	Q08561	116 aa		2.17	□□□□□ -2.06
AIM4	YBR194W	USB1	Q12208	290 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.17	□□□□□ -2.06
AIM4	YBR194W	CDC7	P06243	507 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	MRS1	P07266	363 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	CCA1	P21269	546 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	POP4	P38336	279 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	YER188W	P40103	239 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	PDS1	P40316	373 aa	Predicted RBP	2.16	□□□□□ -2.06
AIM4	YBR194W	YGR050C	P53231	118 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	NRK1	P53915	240 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	COG5	P53951	403 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	PEX12	Q04370	399 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	ATG39	Q06159	398 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	YOR268C	Q08734	132 aa		2.16	□□□□□ -2.06
AIM4	YBR194W	Q0255	P03881	472 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.15	□□□□□ -2.07	not detected
AIM4	YBR194W	RSA4	P25382	515 aa	Known RBP	2.15	□□□□□ -2.07
AIM4	YBR194W	ATG22	P25568	528 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	MGT1	P26188	188 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	SKG1	P36169	355 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	FES1	P38260	290 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	MED6	P38782	295 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	YHR125W	P38831	101 aa		2.15	□□□□□ -2.07
AIM4	YBR194W	AST2	P39945	430 aa	Known RBP	2.15	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms