RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C STD1Q02794 444 aa5.56□□□□□ -1.52
LDB7YBL006C ATO3Q12359 275 aa5.56□□□□□ -1.52
LDB7YBL006C RPS31P05759 152 aaKnown RBP5.55□□□□□ -1.52
LDB7YBL006C YLL053CP0CD98 152 aa5.55□□□□□ -1.52
LDB7YBL006C TOM40P23644 387 aaKnown RBP5.55□□□□□ -1.52
LDB7YBL006C AGA2P32781 87 aa5.55□□□□□ -1.52
LDB7YBL006C VAM7P32912 316 aa5.55□□□□□ -1.52
LDB7YBL006C PMU1P36069 295 aa5.55□□□□□ -1.52
LDB7YBL006C SWD3P38123 315 aa5.55□□□□□ -1.52
LDB7YBL006C GPI14P47088 403 aaKnown RBP5.55□□□□□ -1.52
LDB7YBL006C BXI1P48558 297 aa5.55□□□□□ -1.52
LDB7YBL006C SKP1P52286 194 aa5.55□□□□□ -1.52
LDB7YBL006C YNL234WP53857 426 aa5.55□□□□□ -1.52
LDB7YBL006C CTF19Q02732 369 aa5.55□□□□□ -1.52
LDB7YBL006C HED1Q03937 162 aa5.55□□□□□ -1.52
LDB7YBL006C DAL4Q04895 635 aa5.55□□□□□ -1.52
LDB7YBL006C NOC4Q06512 552 aaPredicted RBP5.55□□□□□ -1.52
LDB7YBL006C FCY1Q12178 158 aa5.55□□□□□ -1.52
LDB7YBL006C YOR192C-CQ3E736 78 aa5.55□□□□□ -1.52
LDB7YBL006C RFA3P26755 122 aaKnown RBP5.54□□□□□ -1.52
LDB7YBL006C ERG3P32353 365 aa5.54□□□□□ -1.52
LDB7YBL006C SHE2P36068 246 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
LDB7YBL006C YBR137WP38276 179 aa5.54□□□□□ -1.52
LDB7YBL006C PCL6P40038 420 aa5.54□□□□□ -1.52
LDB7YBL006C DDI1P40087 428 aa5.54□□□□□ -1.52
LDB7YBL006C BNA6P43619 295 aa5.54□□□□□ -1.52
LDB7YBL006C FIP1P45976 327 aa5.54□□□□□ -1.52
LDB7YBL006C YJR056CP47115 236 aa5.54□□□□□ -1.52
LDB7YBL006C EFM3P47163 339 aa5.54□□□□□ -1.52
LDB7YBL006C YDR415CQ04033 374 aaPredicted RBP5.54□□□□□ -1.52
LDB7YBL006C YOL118CQ08259 102 aa5.54□□□□□ -1.52
LDB7YBL006C ADE8P04161 214 aa5.53□□□□□ -1.52
LDB7YBL006C HIS3P06633 220 aa5.53□□□□□ -1.52
LDB7YBL006C PHO85P17157 305 aa5.53□□□□□ -1.52
LDB7YBL006C RPL5P26321 297 aaKnown RBP5.53□□□□□ -1.52
LDB7YBL006C OCH1P31755 480 aa5.53□□□□□ -1.52
LDB7YBL006C ECM31P38122 312 aa5.53□□□□□ -1.52
LDB7YBL006C NTC20P38302 140 aaPredicted RBP5.53□□□□□ -1.52
LDB7YBL006C SMB1P40018 196 aaKnown RBP5.53□□□□□ -1.52
LDB7YBL006C SYS1P41544 203 aa5.53□□□□□ -1.52
LDB7YBL006C RCF1Q03713 159 aa5.53□□□□□ -1.52
LDB7YBL006C HNT1Q04344 158 aaKnown RBP5.53□□□□□ -1.52
LDB7YBL006C FIT1Q04433 528 aa5.53□□□□□ -1.52
LDB7YBL006C ALG6Q12001 544 aaKnown RBP5.53□□□□□ -1.52
LDB7YBL006C ATG41Q12048 136 aa5.53□□□□□ -1.52
LDB7YBL006C TFC7Q12415 435 aa5.53□□□□□ -1.52
LDB7YBL006C RPS18AP0CX55 146 aaKnown RBP5.52□□□□□ -1.53
LDB7YBL006C RPS18BP0CX56 146 aaPredicted RBP5.52□□□□□ -1.53
LDB7YBL006C HEM13P11353 328 aaKnown RBP5.52□□□□□ -1.53
LDB7YBL006C DPB2P24482 689 aaPredicted RBP5.52□□□□□ -1.53
LDB7YBL006C VMA5P31412 392 aaKnown RBP5.52□□□□□ -1.53
LDB7YBL006C ERG2P32352 222 aa5.52□□□□□ -1.53
LDB7YBL006C GVP36P40531 326 aaKnown RBP5.52□□□□□ -1.53
LDB7YBL006C YJL118WP47022 219 aa5.52□□□□□ -1.53
LDB7YBL006C FMP48P53233 369 aa5.52□□□□□ -1.53
LDB7YBL006C SRL4Q03085 281 aa5.52□□□□□ -1.53
LDB7YBL006C VPS71Q03433 280 aa5.52□□□□□ -1.53
LDB7YBL006C GRX3Q03835 250 aa5.52□□□□□ -1.53
LDB7YBL006C SPG4Q04438 115 aa5.52□□□□□ -1.53
LDB7YBL006C HOF1Q05080 669 aa5.52□□□□□ -1.53
LDB7YBL006C MRPL35Q06678 367 aa5.52□□□□□ -1.53
LDB7YBL006C LAS17Q12446 633 aa5.52□□□□□ -1.53
LDB7YBL006C CHO1P08456 276 aa5.51□□□□□ -1.53
LDB7YBL006C RFA1P22336 621 aaKnown RBP5.51□□□□□ -1.53
LDB7YBL006C COQ2P32378 372 aa5.51□□□□□ -1.53
LDB7YBL006C SPS18P32572 300 aa5.51□□□□□ -1.53
LDB7YBL006C PRM5P40476 318 aa5.51□□□□□ -1.53
LDB7YBL006C DIE2P50076 525 aa5.51□□□□□ -1.53
LDB7YBL006C YGR151CP53287 111 aa5.51□□□□□ -1.53
LDB7YBL006C ODC2Q99297 307 aa5.51□□□□□ -1.53
LDB7YBL006C BUD23P25627 275 aaPredicted RBP5.5□□□□□ -1.53
LDB7YBL006C YIL060WP40519 144 aa5.5□□□□□ -1.53
LDB7YBL006C WWM1P43582 211 aaKnown RBP5.5□□□□□ -1.53
LDB7YBL006C SOL1P50278 321 aa5.5□□□□□ -1.53
LDB7YBL006C VHT1P53241 593 aa5.5□□□□□ -1.53
LDB7YBL006C YMR130WQ04223 302 aa5.5□□□□□ -1.53
LDB7YBL006C GPN3Q06543 272 aa5.5□□□□□ -1.53
LDB7YBL006C DGK1Q12382 290 aa5.5□□□□□ -1.53
LDB7YBL006C URA3P03962 267 aa5.49□□□□□ -1.53
LDB7YBL006C AAC1P04710 309 aa5.49□□□□□ -1.53
LDB7YBL006C RPL24BP24000 155 aaKnown RBP5.49□□□□□ -1.53
LDB7YBL006C FEN2P25621 512 aaKnown RBP5.49□□□□□ -1.53
LDB7YBL006C YCR061WP25639 631 aa5.49□□□□□ -1.53
LDB7YBL006C INO2P26798 304 aa5.49□□□□□ -1.53
LDB7YBL006C RPB7P34087 171 aa5.49□□□□□ -1.53
LDB7YBL006C YFL054CP43549 646 aa5.49□□□□□ -1.53
LDB7YBL006C RPA43P46669 326 aa5.49□□□□□ -1.53
LDB7YBL006C PUS4P48567 403 aaKnown RBP5.49□□□□□ -1.53
LDB7YBL006C YIP1P53039 248 aa5.49□□□□□ -1.53
LDB7YBL006C YDR286CQ05530 114 aa5.49□□□□□ -1.53
LDB7YBL006C YPD1Q07688 167 aa5.49□□□□□ -1.53
LDB7YBL006C URA6P15700 204 aa5.48□□□□□ -1.53
LDB7YBL006C MSN1P22148 382 aa5.48□□□□□ -1.53
LDB7YBL006C IFM1P25038 676 aa5.48□□□□□ -1.53
LDB7YBL006C MIG1P27705 504 aa5.48□□□□□ -1.53
LDB7YBL006C REC104P33323 182 aa5.48□□□□□ -1.53
LDB7YBL006C UTP30P36144 274 aaKnown RBP5.48□□□□□ -1.53
LDB7YBL006C OTU1P43558 301 aa5.48□□□□□ -1.53
LDB7YBL006C ATG18P43601 500 aa5.48□□□□□ -1.53
LDB7YBL006C COX18P53239 316 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms