RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C SHO1P40073 367 aa2□□□□□ -2.09
CLN3YAL040C YIL169CP40442 995 aa2□□□□□ -2.09
CLN3YAL040C RPE1P46969 238 aa2□□□□□ -2.09
CLN3YAL040C MDV1P47025 714 aa2□□□□□ -2.09
CLN3YAL040C IRC18P47056 224 aa2□□□□□ -2.09
CLN3YAL040C COX16P47081 118 aa2□□□□□ -2.09
CLN3YAL040C COS10P52924 374 aa2□□□□□ -2.09
CLN3YAL040C YGL101WP53144 215 aa2□□□□□ -2.09
CLN3YAL040C PXR1P53335 271 aaPredicted RBP2□□□□□ -2.09
CLN3YAL040C ERV29P53337 310 aa2□□□□□ -2.09
CLN3YAL040C SMM1P53720 384 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C ATP23P53722 227 aa2□□□□□ -2.09
CLN3YAL040C MRPL50P53724 139 aa2□□□□□ -2.09
CLN3YAL040C YDR102CQ03864 110 aa2□□□□□ -2.09
CLN3YAL040C YMR315WQ04869 349 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C ADH6Q04894 360 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C TPO3Q06451 622 aa2□□□□□ -2.09
CLN3YAL040C YOR343CQ12484 108 aa2□□□□□ -2.09
CLN3YAL040C CDC39P25655 2108 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C MES1P00958 751 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C HIS3P06633 220 aa1.99□□□□□ -2.09
CLN3YAL040C SGA1P08019 549 aa1.99□□□□□ -2.09
CLN3YAL040C MATALPHA1P0CY06 175 aa1.99□□□□□ -2.09
CLN3YAL040C HMLALPHA1P0CY07 175 aa1.99□□□□□ -2.09
CLN3YAL040C MRP1P10662 321 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C NHP6BP11633 99 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C MAK32P23060 363 aa1.99□□□□□ -2.09
CLN3YAL040C SCO1P23833 295 aa1.99□□□□□ -2.09
CLN3YAL040C BUD23P25627 275 aaPredicted RBP1.99□□□□□ -2.09
CLN3YAL040C NAM9P27929 486 aa1.99□□□□□ -2.09
CLN3YAL040C ERG9P29704 444 aa1.99□□□□□ -2.09
CLN3YAL040C ITR1P30605 584 aa1.99□□□□□ -2.09
CLN3YAL040C TOA2P32774 122 aa1.99□□□□□ -2.09
CLN3YAL040C TMA19P35691 167 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C RCN1P36054 211 aa1.99□□□□□ -2.09
CLN3YAL040C ANR2P36090 516 aaPredicted RBP1.99□□□□□ -2.09
CLN3YAL040C FMP23P38231 175 aa1.99□□□□□ -2.09
CLN3YAL040C LAG1P38703 411 aa1.99□□□□□ -2.09
CLN3YAL040C HPA3P39979 161 aa1.99□□□□□ -2.09
CLN3YAL040C RFC4P40339 323 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C CUP9P41817 306 aa1.99□□□□□ -2.09
CLN3YAL040C YJL118WP47022 219 aa1.99□□□□□ -2.09
CLN3YAL040C DOC1P53068 250 aa1.99□□□□□ -2.09
CLN3YAL040C PAU12P53343 120 aa1.99□□□□□ -2.09
CLN3YAL040C BUD25P85052 153 aa1.99□□□□□ -2.09
CLN3YAL040C NUP116Q02630 1113 aa1.99□□□□□ -2.09
CLN3YAL040C PET191Q02772 108 aa1.99□□□□□ -2.09
CLN3YAL040C YDR387CQ04162 555 aa1.99□□□□□ -2.09
CLN3YAL040C GIM5Q04493 163 aa1.99□□□□□ -2.09
CLN3YAL040C SDO1Q07953 250 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C LDS2Q08218 356 aa1.99□□□□□ -2.09
CLN3YAL040C AKR2Q12013 749 aa1.99□□□□□ -2.09
CLN3YAL040C YOR283WQ12040 230 aaKnown RBP1.99□□□□□ -2.09
CLN3YAL040C MCP1Q12106 302 aa1.99□□□□□ -2.09
CLN3YAL040C YOR029WQ12243 111 aa1.99□□□□□ -2.09
CLN3YAL040C YGL041W-AP0C5N3 154 aa1.98□□□□□ -2.09
CLN3YAL040C CAP2P13517 287 aa1.98□□□□□ -2.09
CLN3YAL040C MDH2P22133 377 aa1.98□□□□□ -2.09
CLN3YAL040C AIM17P23180 465 aaKnown RBP1.98□□□□□ -2.09
CLN3YAL040C YCR007CP25354 239 aa1.98□□□□□ -2.09
CLN3YAL040C ATG22P25568 528 aa1.98□□□□□ -2.09
CLN3YAL040C HOM6P31116 359 aaKnown RBP1.98□□□□□ -2.09
CLN3YAL040C VMA5P31412 392 aaKnown RBP1.98□□□□□ -2.09
CLN3YAL040C TRS65P32893 560 aa1.98□□□□□ -2.09
CLN3YAL040C MNS1P32906 549 aa1.98□□□□□ -2.09
CLN3YAL040C MRPS5P33759 307 aa1.98□□□□□ -2.09
CLN3YAL040C GPX1P36014 167 aa1.98□□□□□ -2.09
CLN3YAL040C MBA1P38300 278 aa1.98□□□□□ -2.09
CLN3YAL040C CIN2P46670 268 aa1.98□□□□□ -2.09
CLN3YAL040C PGU1P47180 361 aa1.98□□□□□ -2.09
CLN3YAL040C ARO8P53090 500 aaKnown RBP1.98□□□□□ -2.09
CLN3YAL040C FMP48P53233 369 aa1.98□□□□□ -2.09
CLN3YAL040C OKP1P53298 406 aa1.98□□□□□ -2.09
CLN3YAL040C MIX14Q04341 121 aa1.98□□□□□ -2.09
CLN3YAL040C MRX8Q05473 314 aa1.98□□□□□ -2.09
CLN3YAL040C BER1Q06688 274 aaKnown RBP1.98□□□□□ -2.09
CLN3YAL040C HEM25Q07534 307 aa1.98□□□□□ -2.09
CLN3YAL040C IRC19Q07843 230 aa1.98□□□□□ -2.09
CLN3YAL040C COQ10Q08058 207 aa1.98□□□□□ -2.09
CLN3YAL040C MCH4Q08268 501 aa1.98□□□□□ -2.09
CLN3YAL040C SET6Q12529 373 aa1.98□□□□□ -2.09
CLN3YAL040C NUM1Q00402 2748 aa1.98□□□□□ -2.09
CLN3YAL040C FLO9P39712 1322 aa1.98□□□□□ -2.09
CLN3YAL040C YER145C-AA0A023PYF4 145 aa1.97□□□□□ -2.09
CLN3YAL040C YBR056W-AI2HB52 66 aa1.97□□□□□ -2.09
CLN3YAL040C YAL064W-BO13512 126 aa1.97□□□□□ -2.09
CLN3YAL040C GCN3P14741 305 aa1.97□□□□□ -2.09
CLN3YAL040C DBF2P22204 572 aa1.97□□□□□ -2.09
CLN3YAL040C AHC2P25649 128 aa1.97□□□□□ -2.09
CLN3YAL040C CPR3P25719 182 aa1.97□□□□□ -2.09
CLN3YAL040C EHD3P28817 500 aa1.97□□□□□ -2.09
CLN3YAL040C ATS1P31386 333 aa1.97□□□□□ -2.09
CLN3YAL040C ACB1P31787 87 aa1.97□□□□□ -2.09
CLN3YAL040C PAU2P32612 120 aa1.97□□□□□ -2.09
CLN3YAL040C AGA2P32781 87 aa1.97□□□□□ -2.09
CLN3YAL040C CLG1P35190 452 aa1.97□□□□□ -2.09
CLN3YAL040C SHE2P36068 246 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
CLN3YAL040C SRL3P36167 246 aa1.97□□□□□ -2.09
CLN3YAL040C RTC3P38804 111 aaPredicted RBP1.97□□□□□ -2.09
CLN3YAL040C SUR2P38992 349 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms