RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SLC9A1P19634 815 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 EPHB4P54760 987 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 WDR5P61964 334 aaKnown RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 NCOA4Q13772 614 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 PSRC1Q6PGN9 363 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 TMC6Q7Z403 805 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 GSTCDQ8NEC7 633 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 LSM14BQ9BX40 385 aaKnown RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 INTS2Q9H0H0 1204 aaKnown RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 FAM207AQ9NSI2 230 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 SLC38A7Q9NVC3 462 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 RAB20Q9NX57 234 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 HOXA2O43364 376 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 HLA-DRAP01903 254 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 DEFB103AP81534 67 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 KCNMA1Q12791 1236 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 EPC2Q52LR7 807 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 SPECC1LQ69YQ0 1117 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 VSTM4Q8IW00 320 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 PPP1R10Q96QC0 940 aaKnown RBP18.85■□□□□ 0.61
PHGDH-230ENST00000641927 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.616e-10■■■■□ 22.4
PHGDH-230ENST00000641927 ITGA11Q9UKX5 1188 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 PMM2O15305 246 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 VNN1O95497 513 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 TRIM21P19474 475 aaKnown RBP18.84■□□□□ 0.61
PHGDH-230ENST00000641927 PON1P27169 355 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 PBX1P40424 430 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 GATMP50440 423 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 RNASELQ05823 741 aaKnown RBP18.84■□□□□ 0.61
PHGDH-230ENST00000641927 LRMPQ12912 555 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 FAM117BQ6P1L5 589 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 TRIM65Q6PJ69 517 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 CCDC150Q8NCX0 1101 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 EHBP1Q8NDI1 1231 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 NEK11Q8NG66 645 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 PI4K2AQ9BTU6 479 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 IMPG2Q9BZV3 1241 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 GOLGA2P5Q9HBQ8 144 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 SIK3Q9Y2K2 1263 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 TTC3P53804 2025 aa18.84■□□□□ 0.61
PHGDH-230ENST00000641927 LRRN2O75325 713 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-230ENST00000641927 CDC25BP30305 580 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 POLR2BP30876 1174 aaKnown RBP18.83■□□□□ 0.61
PHGDH-230ENST00000641927 APBA1Q02410 837 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 SOX4Q06945 474 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-230ENST00000641927 GRIK3Q13003 919 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 WDR44Q5JSH3 913 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 TMEM240Q5SV17 173 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 SCARA3Q6AZY7 606 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-230ENST00000641927 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-230ENST00000641927 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 COQ4Q9Y3A0 265 aa18.83■□□□□ 0.61
PHGDH-230ENST00000641927 TBKBP1A7MCY6 615 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 MYL6P60660 151 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 RBP5P82980 135 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 CRIPAKQ8N1N5 446 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 TOP1MTQ969P6 601 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 KANSL3Q9P2N6 904 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 SIX4Q9UIU6 781 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 PDCD11Q14690 1871 aaKnown RBP18.82■□□□□ 0.6
PHGDH-230ENST00000641927 CASTOR2A6NHX0 329 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 CYP3A5P20815 502 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 PAN2Q504Q3 1202 aaKnown RBP18.82■□□□□ 0.6
PHGDH-230ENST00000641927 LMO3Q8TAP4 145 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 CPLX3Q8WVH0 158 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 CASD1Q96PB1 797 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 FAM193BQ96PV7 902 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-230ENST00000641927 TBC1D13Q9NVG8 400 aa18.82■□□□□ 0.6
PHGDH-230ENST00000641927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.82■□□□□ 0.61e-6■□□□□ 10.9
PHGDH-230ENST00000641927 ITIH6Q6UXX5 1313 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 INPPL1O15357 1258 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 ZNF699Q32M78 642 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 C9orf57Q5W0N0 161 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 SPOPLQ6IQ16 392 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 PPFIBP1Q86W92 1011 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 NT5C1BQ96P26 610 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 CXXC1Q9P0U4 656 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-230ENST00000641927 CACNG4Q9UBN1 327 aa18.81■□□□□ 0.6
PHGDH-230ENST00000641927 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-230ENST00000641927 MYO1EQ12965 1108 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 TUSC3Q13454 348 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 NAB2Q15742 525 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 HPDLQ96IR7 371 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 NUP58Q9BVL2 599 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 MRPL9Q9BYD2 267 aaKnown RBP18.8■□□□□ 0.6
PHGDH-230ENST00000641927 MTIF3Q9H2K0 278 aaKnown RBP18.8■□□□□ 0.6
PHGDH-230ENST00000641927 PLCB1Q9NQ66 1216 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms