RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 USP15Q9Y4E8 981 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MROH7Q68CQ1 1323 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 LRRIQ4A6NIV6 560 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 ASAP2O43150 1006 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MUTP22033 750 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 HSD17B4P51659 736 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 WNT7BP56706 349 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 DYNLT1P63172 113 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MYO1EQ12965 1108 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MTMR2Q13614 643 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MYBPC2Q14324 1141 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 P3H1Q32P28 736 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 ACCSLQ4AC99 568 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 BRDTQ58F21 947 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-221ENST00000640341 PIGWQ7Z7B1 504 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 MCF2L2Q86YR7 1114 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 DDX1Q92499 740 aaKnown RBP15.53■□□□□ 0.08
SCARB2-221ENST00000640341 C10orf88Q9H8K7 445 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 KIF9Q9HAQ2 790 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 NINJ2Q9NZG7 142 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 SUN1O94901 812 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 ATP6V1G2O95670 118 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 TCF4P15884 667 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 KRT15P19012 456 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 VSTM1Q6UX27 236 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 TRMT10CQ7L0Y3 403 aaKnown RBP15.53■□□□□ 0.08
SCARB2-221ENST00000640341 C4orf33Q8N1A6 199 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 SPOCK2Q92563 424 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 VPS37BQ9H9H4 285 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 SAYSD1Q9NPB0 183 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 NAALADL1Q9UQQ1 740 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 SIPA1L1O43166 1804 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 IGF2BP3O00425 579 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCARB2-221ENST00000640341 TLR3O15455 904 aaKnown RBP15.52■□□□□ 0.08
SCARB2-221ENST00000640341 ITIH2P19823 946 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 XRCC4Q13426 336 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 PRAMEF18Q5VWM3 479 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 USP37Q86T82 979 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 GPD1LQ8N335 351 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 GLIS1Q8NBF1 620 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 STAMBPL1Q96FJ0 436 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 RBM15Q96T37 977 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCARB2-221ENST00000640341 DCLK3Q9C098 648 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 UBIAD1Q9Y5Z9 338 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 UBR3Q6ZT12 1888 aa15.52■□□□□ 0.08
SCARB2-221ENST00000640341 FSCN2O14926 492 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 TP73O15350 636 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ZNF862O60290 1169 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 GRIN3BO60391 1043 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.07
SCARB2-221ENST00000640341 CDC25CP30307 473 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 NEDD9Q14511 834 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 SPDYCQ5MJ68 293 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 SCARA3Q6AZY7 606 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 MAP4K3Q8IVH8 894 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ATL2Q8NHH9 583 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 SPIRE2Q8WWL2 714 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ZNF668Q96K58 619 aaPredicted RBP15.52■□□□□ 0.07
SCARB2-221ENST00000640341 PDCD2LQ9BRP1 358 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ATAD5Q96QE3 1844 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 HLA-DRAP01903 254 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 GPC3P51654 580 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 NCKAP1LP55160 1127 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 NLRP11P59045 1033 aaKnown RBP15.52■□□□□ 0.07
SCARB2-221ENST00000640341 CYP1B1Q16678 543 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 LACTB2Q53H82 288 aaPredicted RBP15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ZBTB41Q5SVQ8 909 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 SYCP2LQ5T4T6 812 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 PCNX4Q63HM2 1172 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 SPATA21Q7Z572 469 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 ZNF516Q92618 1163 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 OSBPL8Q9BZF1 889 aa15.52■□□□□ 0.07
SCARB2-221ENST00000640341 EXOC1LA0A1B0GW35 172 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 BANF1O75531 89 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 GNA15P30679 374 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 DSG3P32926 999 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 PTGER2P43116 358 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 DNAJC3Q13217 504 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 ANKS1BQ7Z6G8 1248 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 C4orf19Q8IY42 314 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 MORC4Q8TE76 937 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 VTI1AQ96AJ9 217 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 RMDN2Q96LZ7 410 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 TCHPQ9BT92 498 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 TRAIPQ9BWF2 469 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-221ENST00000640341 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-221ENST00000640341 WDR91A4D1P6 747 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 RPL7AP62424 266 aaKnown RBP15.51■□□□□ 0.07
SCARB2-221ENST00000640341 CROCCP2Q86T23 111 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 ATG4CQ96DT6 458 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 IFT74Q96LB3 600 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 POLR3FQ9H1D9 316 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-221ENST00000640341 WHRNQ9P202 907 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 SAE1Q9UBE0 346 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-221ENST00000640341 SPATA31A6Q5VVP1 1343 aa15.51■□□□□ 0.07
SCARB2-221ENST00000640341 LY75O60449 1722 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms