RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 HNRNPCL1O60812 293 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GJB6O95452 261 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CCNB1P14635 433 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 KRT15P19012 456 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 KLRC1P26715 233 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GPSM2P81274 684 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 MRPS9P82933 396 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 OCLNQ16625 522 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 DSTYKQ6XUX3 929 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ANKRD35Q8N283 1001 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 HIPK4Q8NE63 616 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SKA1Q96BD8 255 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 VPS50Q96JG6 964 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PURBQ96QR8 312 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ECSITQ9BQ95 431 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 NUP85Q9BW27 656 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 MRPL1Q9BYD6 325 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PAIP1Q9H074 479 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 UBN1Q9NPG3 1134 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ATP8A2Q9NTI2 1148 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TBCCD1Q9NVR7 557 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ARMCX3Q9UH62 379 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 FRMPD3Q5JV73 1810 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 PITPNM2Q9BZ72 1349 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF263O14978 683 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 TBCAO75347 108 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 NAT2P11245 290 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 HOXB1P14653 301 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 GM2AP17900 193 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RPL5P46777 297 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 ASIC1P78348 528 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 IRX4P78413 519 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 KRT81Q14533 505 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RGS9BPQ6ZS82 235 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC105Q8IYK2 499 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 ICA1LQ8NDH6 482 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 FNDC8Q8TC99 324 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 ESR2Q92731 530 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 OLFML3Q9NRN5 406 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 TRNAU1APQ9NX07 287 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 SLC4A4Q9Y6R1 1079 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 LDHCP07864 332 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 IL15P40933 162 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RHBDL3P58872 404 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 PPP2R5EQ16537 467 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RFWD3Q6PCD5 774 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 DEFB132Q7Z7B7 95 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 KIAA2013Q8IYS2 634 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 SH3TC2Q8TF17 1288 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 CRNKL1Q9BZJ0 848 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 SEMA4AQ9H3S1 761 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 PLGRKTQ9HBL7 147 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 ANLNQ9NQW6 1124 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 GID8Q9NWU2 228 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 STX18Q9P2W9 335 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 SEL1LQ9UBV2 794 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RPL26L1Q9UNX3 145 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 POTEB3A0JP26 581 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 SCG2P13521 617 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 MCM7P33993 719 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 MCAMP43121 646 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 POLR2FP61218 127 aaKnown RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RTN1Q16799 776 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 POTEBQ6S5H4 581 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 FAM196AQ6ZSG2 479 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 EPM2AIP1Q7L775 607 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 COX4I2Q96KJ9 171 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 NACAP1Q9BZK3 213 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 KLHL25Q9H0H3 589 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 FAIMQ9NVQ4 179 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 AMFRQ9UKV5 643 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 COQ6Q9Y2Z9 468 aa7.53□□□□□ -1.2
NECAP1-213ENST00000638883 COL11A1P12107 1806 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-213ENST00000638883 RFX7Q2KHR2 1363 aa7.52□□□□□ -1.2
NECAP1-213ENST00000638883 PDS5AQ29RF7 1337 aaKnown RBP7.52□□□□□ -1.2
NECAP1-213ENST00000638883 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.2
NECAP1-213ENST00000638883 DDX3XO00571 662 aaKnown RBP eCLIP7.52□□□□□ -1.21
NECAP1-213ENST00000638883 THAP12O43422 761 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 GMNNO75496 209 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 TRMUO75648 421 aaKnown RBP7.52□□□□□ -1.21
NECAP1-213ENST00000638883 ITGA4P13612 1032 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 CDH3P22223 829 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 SCNN1AP37088 669 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 RELAQ04206 551 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 FUT2Q10981 343 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 ACSBG2Q5FVE4 666 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 CYB5R4Q7L1T6 521 aa7.52□□□□□ -1.21
NECAP1-213ENST00000638883 MTDHQ86UE4 582 aaKnown RBP7.52□□□□□ -1.21
NECAP1-213ENST00000638883 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms