RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	ELF2	Q15723	593 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	COL28A1	Q2UY09	1125 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	RALGPS2	Q86X27	583 aa	Predicted RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	CCDC12	Q8WUD4	166 aa	Predicted RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	RSPRY1	Q96DX4	576 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	DUSP15	Q9H1R2	295 aa	Predicted RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	CXCL16	Q9H2A7	254 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	RWDD1	Q9H446	243 aa	Predicted RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	CYP4F11	Q9HBI6	524 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	TMEM9B	Q9NQ34	198 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	SNTG2	Q9NY99	539 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	GTSE1	Q9NYZ3	720 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	ANKFY1	Q9P2R3	1169 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	BRPF3	Q9ULD4	1205 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	CCDC163	A0A0D9SF12	145 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	DCLK1	O15075	740 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	CHAD	O15335	359 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	AKAP3	O75969	853 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	TH	P07101	528 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	CDC27	P30260	824 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	QARS	P47897	775 aa	Known RBP	12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	USP11	P51784	963 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	FGD1	P98174	961 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	ROR1	Q01973	937 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	MBTD1	Q05BQ5	628 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	TEAD2	Q15562	447 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	AMHR2	Q16671	573 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	IQCE	Q6IPM2	695 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	B3GNT9	Q6UX72	402 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	PROSER1	Q86XN7	944 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	ELMOD1	Q8N336	334 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	SYNPO	Q8N3V7	929 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	ZNF461	Q8TAF7	563 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	ZFYVE19	Q96K21	471 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	TRPV4	Q9HBA0	871 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	INSL5	Q9Y5Q6	135 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	BACE2	Q9Y5Z0	518 aa		12.99	□□□□□ -0.33
PAX6-238	ENST00000638755	ATG2B	Q96BY7	2078 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	EML5	Q05BV3	1969 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	CACNA1E	Q15878	2313 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	BCLAF3	A2AJT9	711 aa	Known RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755		I3L4J1	428 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	EML1	O00423	815 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	CDX4	O14627	284 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	PTGES	O14684	152 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	KHNYN	O15037	678 aa	Known RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	MOSPD3	O75425	235 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	B3GAT3	O94766	335 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	RHOBTB1	O94844	696 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	SEC24A	O95486	1093 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	TDP2	O95551	362 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	TFDP1	Q14186	410 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	MXD4	Q14582	209 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	ANKS3	Q6ZW76	656 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	E2F7	Q96AV8	911 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	DDX27	Q96GQ7	796 aa	Known RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	ZNF512	Q96ME7	567 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	TCEANC2	Q96MN5	208 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	BBC3	Q96PG8	261 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	MTR	Q99707	1265 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	MKNK1	Q9BUB5	465 aa		12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	SLK	Q9H2G2	1235 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.98	□□□□□ -0.33
PAX6-238	ENST00000638755	ZMYM2	Q9UBW7	1377 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	SPAAR	A0A1B0GVQ0	90 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	PATE3	B3GLJ2	98 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	SLC27A2	O14975	620 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	ABLIM3	O94929	683 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	IGHD	P01880	384 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	PRKCB	P05771	671 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	ATF2	P15336	505 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	GBP1	P32455	592 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	NAB2	Q15742	525 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755		Q4G0T1	1027 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	XKR9	Q5GH70	373 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	TTC22	Q5TAA0	569 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	TCEAL8	Q8IYN2	117 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	BICD2	Q8TD16	824 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	TBCK	Q8TEA7	893 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	HHIP	Q96QV1	700 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	ASAH2	Q9NR71	780 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	CEP72	Q9P209	647 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	PPME1	Q9Y570	386 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	BPTF	Q12830	3046 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	ASCC3	Q8N3C0	2202 aa	Known RBP	12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	NAV2	Q8IVL1	2488 aa		12.97	□□□□□ -0.33
PAX6-238	ENST00000638755	KLF18	A0A0U1RQI7	1052 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755		A0A1B0GUA9	196 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	ZBTB39	O15060	712 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	YWHAB	P31946	246 aa	Known RBP	12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	ADD1	P35611	737 aa	Known RBP	12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	BRCC3	P46736	316 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	SIM1	P81133	766 aa	Predicted RBP	12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	TNK2	Q07912	1038 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	FCHO2	Q0JRZ9	810 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	CAPS	Q13938	189 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	SLC8B1	Q6J4K2	584 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	ASAP3	Q8TDY4	903 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms