RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	KLHL4	Q9C0H6	718 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	NDEL1	Q9GZM8	345 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ZMYND12	Q9H0C1	365 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	DPH5	Q9H2P9	285 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	GGNBP2	Q9H3C7	697 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	PARVG	Q9HBI0	331 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ZFYVE28	Q9HCC9	887 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	TRPC7	Q9HCX4	862 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	CD209	Q9NNX6	404 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	RBM12	Q9NTZ6	932 aa	Known RBP	4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ATAD3A	Q9NVI7	634 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	NDE1	Q9NXR1	346 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	UVRAG	Q9P2Y5	699 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	EPS15L1	Q9UBC2	864 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNHIT2	Q9UHR6	403 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	RABGEF1	Q9UJ41	708 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	OGDHL	Q9ULD0	1010 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ANGEL1	Q9UNK9	670 aa	Known RBP	4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	GIT1	Q9Y2X7	761 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF711	Q9Y462	761 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	PCDHB2	Q9Y5E7	798 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	CAPN6	Q9Y6Q1	641 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	SCIN	Q9Y6U3	715 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	EDC4	Q6P2E9	1401 aa	Known RBP	4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	ADAMTS20	P59510	1910 aa		4.27	□□□□□ -1.73
CHD2-225	ENST00000636861	TLN1	Q9Y490	2541 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	LAMA4	Q16363	1823 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PTPRQ	Q9UMZ3	2332 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	NF1	P21359	2839 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	IQANK1	A0A1B0GTG1	560 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	CCDC160	A6NGH7	325 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TBKBP1	A7MCY6	615 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	GOLGA8B	A8MQT2	603 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	SYCE1L	A8MT33	242 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TMEM114	B3SHH9	223 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861		H0YC42	278 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	GOLGA8M	H3BSY2	632 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	EIF3F	O00303	357 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PDE2A	O00408	941 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PSMA7	O14818	248 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	MCF2L	O15068	1137 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	KMO	O15229	486 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	RNMT	O43148	476 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	AP1G1	O43747	822 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	SPAG7	O75391	227 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TAF5L	O75529	589 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PSMG1	O95456	288 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	LDHA	P00338	332 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	APOE	P02649	317 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	AFP	P02771	609 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	ATP5B	P06576	529 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	HOXB7	P09629	217 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	ALOX5	P09917	674 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PYGM	P11217	842 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	FOSL1	P15407	271 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	RPL17	P18621	184 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PDIA3	P30101	505 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	HMOX2	P30519	316 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	HNRNPH3	P31942	346 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	STX2	P32856	288 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	IRS1	P35568	1242 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TPD52	P55327	224 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	BASP1	P80723	227 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	IL9R	Q01113	521 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TRIM32	Q13049	653 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	MSLN	Q13421	630 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	PDAP1	Q13442	181 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	DHX34	Q14147	1143 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	EIF4A2	Q14240	407 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF423	Q2M1K9	1284 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	KRT24	Q2M2I5	525 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TRMT5	Q32P41	509 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	MCMDC2	Q4G0Z9	681 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	VWA3B	Q502W6	1294 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	OTUD7B	Q6GQQ9	843 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	MFSD5	Q6N075	450 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	NIPAL1	Q6NVV3	410 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	LRRC8B	Q6P9F7	803 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	SLC2A7	Q6PXP3	512 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	C17orf99	Q6UX52	265 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TRIM67	Q6ZTA4	783 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	CYP2U1	Q7Z449	544 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	BMP8A	Q7Z5Y6	402 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	NET1	Q7Z628	596 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	RALYL	Q86SE5	291 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	ADGRG6	Q86SQ4	1221 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	CCDC84	Q86UT8	332 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	AACS	Q86V21	672 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	VPS37D	Q86XT2	251 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TRIM50	Q86XT4	487 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	TRMT44	Q8IYL2	757 aa	Known RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	LSMEM2	Q8N112	164 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	RIBC1	Q8N443	379 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	CSGALNACT2	Q8N6G5	542 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	ALLC	Q8N6M5	410 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	CCDC89	Q8N998	374 aa		4.26	□□□□□ -1.73
CHD2-225	ENST00000636861	MIGA1	Q8NAN2	632 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms