RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 XKR4Q5GH76 650 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 C1orf220Q5T0J3 134 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 WDR49Q8IV35 697 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 DRC7Q8IY82 874 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 CRIPAKQ8N1N5 446 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 OR5B17Q8NGF7 314 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 URGCPQ8TCY9 931 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 CACTINQ8WUQ7 758 aaKnown RBP15.61■□□□□ 0.09
LINC00339-208ENST00000634934 MIOSQ9NXC5 875 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 PTPRJQ12913 1337 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 TTC3P53804 2025 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 TBKBP1A7MCY6 615 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 PTGESO14684 152 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 TNNC2P02585 160 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 AFPP02771 609 aaKnown RBP15.6■□□□□ 0.09
LINC00339-208ENST00000634934 THP07101 528 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 KCNE1P15382 129 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 FANCCQ00597 558 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 ENPEPQ07075 957 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 PPP3CAQ08209 521 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 DUOXA2Q1HG44 320 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 VWA3BQ502W6 1294 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 NYAP1Q6ZVC0 841 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 CCDC150Q8NCX0 1101 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 GSTCDQ8NEC7 633 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 C18orf25Q96B23 403 aaPredicted RBP15.6■□□□□ 0.09
LINC00339-208ENST00000634934 LRCH3Q96II8 777 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 ANKRD36BP1Q96IX9 119 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 MTMR12Q9C0I1 747 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 NDST4Q9H3R1 872 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 INTS13Q9NVM9 706 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 DERAQ9Y315 318 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 C2CD2Q9Y426 696 aa15.6■□□□□ 0.09
LINC00339-208ENST00000634934 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
LINC00339-208ENST00000634934 PHACTR2O75167 634 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 GUCY2FP51841 1108 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 CLDN10P78369 228 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 RNASELQ05823 741 aaKnown RBP15.59■□□□□ 0.09
LINC00339-208ENST00000634934 BIRC3Q13489 604 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 FILIP1LQ4L180 1135 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 PAN2Q504Q3 1202 aaKnown RBP15.59■□□□□ 0.09
LINC00339-208ENST00000634934 MIIPQ5JXC2 388 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 NT5DC4Q86YG4 428 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 BEST2Q8NFU1 509 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 CASD1Q96PB1 797 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 PPP1R10Q96QC0 940 aaKnown RBP15.59■□□□□ 0.09
LINC00339-208ENST00000634934 TSPAN18Q96SJ8 248 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 ZBED2Q9BTP6 218 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 TMEM117Q9H0C3 514 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 SLC38A7Q9NVC3 462 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 KANSL3Q9P2N6 904 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 TUBGCP4Q9UGJ1 667 aa15.59■□□□□ 0.09
LINC00339-208ENST00000634934 UBQLN1Q9UMX0 589 aaKnown RBP15.59■□□□□ 0.09
LINC00339-208ENST00000634934 LRRC10BA6NIK2 292 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 XPOTO43592 962 aaKnown RBP15.58■□□□□ 0.09
LINC00339-208ENST00000634934 DGKIO75912 1065 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 ATP2A2P16615 1042 aaKnown RBP15.58■□□□□ 0.09
LINC00339-208ENST00000634934 GTF2H1P32780 548 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 FMO5P49326 533 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 MXI1P50539 228 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 AP3M2P53677 418 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 MCCD1P59942 119 aaPredicted RBP15.58■□□□□ 0.09
LINC00339-208ENST00000634934 RBM10P98175 930 aaKnown RBP15.58■□□□□ 0.09
LINC00339-208ENST00000634934 GRIK3Q13003 919 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 LRIT3Q3SXY7 679 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 CBWD6Q4V339 395 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 CBWD3Q5JTY5 395 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 CBWD5Q5RIA9 395 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 SV2AQ7L0J3 742 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 APTXQ7Z2E3 356 aaKnown RBP15.58■□□□□ 0.09
LINC00339-208ENST00000634934 TMEM130Q8N3G9 435 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 PDCL2Q8N4E4 241 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 IFNKQ9P0W0 207 aa15.58■□□□□ 0.09
LINC00339-208ENST00000634934 CITO14578 2027 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 INPPL1O15357 1258 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 N4BP1O75113 896 aaKnown RBP15.58■□□□□ 0.08
LINC00339-208ENST00000634934 KRT19P08727 400 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 UBASH3AP57075 661 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 MYL7Q01449 175 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 ZBTB6Q15916 424 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 TDRD10Q5VZ19 366 aaKnown RBP15.58■□□□□ 0.08
LINC00339-208ENST00000634934 KRT39Q6A163 491 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 TRAPPC11Q7Z392 1133 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-208ENST00000634934 FAM193BQ96PV7 902 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-208ENST00000634934 SLC9A7Q96T83 725 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 YME1L1Q96TA2 773 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 MRPL9Q9BYD2 267 aaKnown RBP15.58■□□□□ 0.08
LINC00339-208ENST00000634934 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 DPP3Q9NY33 737 aa15.58■□□□□ 0.08
LINC00339-208ENST00000634934 LGALS16A8MUM7 142 aa15.57■□□□□ 0.08
LINC00339-208ENST00000634934 CLSTN1O94985 981 aa15.57■□□□□ 0.08
LINC00339-208ENST00000634934 GJB5O95377 273 aa15.57■□□□□ 0.08
LINC00339-208ENST00000634934 C4BPAP04003 597 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms