RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 FAM213AQ9BRX8 229 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 POLR3FQ9H1D9 316 aaPredicted RBP8.62□□□□□ -1.03
GPC3-204ENST00000631057 ACP6Q9NPH0 428 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 XPNPEP1Q9NQW7 623 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 PICK1Q9NRD5 415 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 WHRNQ9P202 907 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 CHORDC1Q9UHD1 332 aaPredicted RBP8.62□□□□□ -1.03
GPC3-204ENST00000631057 ANAPC7Q9UJX3 599 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPC3-204ENST00000631057 RIPK3Q9Y572 518 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 PCDHB2Q9Y5E7 798 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 WDR90Q96KV7 1748 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 ADGRA3Q8IWK6 1321 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 TCRBV7S2A1N4TA0A589 114 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 C5orf60A6NFR6 353 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 FSBPO95073 299 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 HLA-DRAP01903 254 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SUPT20HL2P0C7V6 817 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 POTEJP0CG39 1038 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 RARGP13631 454 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TMOD1P28289 359 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PIK3CAP42336 1068 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SOX10P56693 466 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ACTR2P61160 394 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CLDN10P78369 228 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PTP4A2Q12974 167 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 DSG2Q14126 1118 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 EMC2Q15006 297 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PPP1R7Q15435 360 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 LIN9Q5TKA1 542 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SLFN12LQ6IEE8 588 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ABHD15Q6UXT9 468 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TRMT10CQ7L0Y3 403 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ZNF280CQ8ND82 737 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 GRK7Q8WTQ7 553 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 P3H4Q92791 437 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ROPN1BQ9BZX4 212 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 ACAD9Q9H845 621 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 EFCC1Q9HA90 598 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ROPN1Q9HAT0 212 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 ADAMTS5Q9UNA0 930 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PTPRFP10586 1907 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SPATA31C2B4DYI2 1134 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ATP2A1O14983 1001 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CLDN3O15551 220 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 RIPK2O43353 540 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 GAS8O95995 478 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PIGRP01833 764 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SHBGP04278 402 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TNNI1P19237 187 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 MMP13P45452 471 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 NSFP46459 744 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 POLGP54098 1239 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 CAV1Q03135 178 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CENPCQ03188 943 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 IFT88Q13099 833 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PTK6Q13882 451 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SLC29A2Q14542 456 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ZACNQ401N2 412 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 MTERF2Q49AM1 385 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 DALRD3Q5D0E6 543 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 ERMARDQ5T6L9 678 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 RNF187Q5TA31 235 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CCDC121Q6ZUS5 278 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CPNE8Q86YQ8 564 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 CCDC60Q8IWA6 550 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 CACNA2D3Q8IZS8 1091 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 WNK4Q96J92 1243 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 XPO6Q96QU8 1125 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 PI4K2AQ9BTU6 479 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 SEMA4AQ9H3S1 761 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ACTR5Q9H9F9 607 aaPredicted RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 HACL1Q9UJ83 578 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 ZNF112Q9UJU3 913 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 AGO2Q9UKV8 859 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 SCAF8Q9UPN6 1271 aaKnown RBP8.61□□□□□ -1.03
GPC3-204ENST00000631057 PTPN22Q9Y2R2 807 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 STYXL1Q9Y6J8 313 aa8.61□□□□□ -1.03
GPC3-204ENST00000631057 MYPNQ86TC9 1320 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 TLDC2A0PJX2 215 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 RASGRF2O14827 1237 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms