RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ATF2P15336 505 aa12□□□□□ -0.49
VARS2-213ENST00000625423 NSFP46459 744 aaKnown RBP12□□□□□ -0.49
VARS2-213ENST00000625423 SNCBQ16143 134 aa12□□□□□ -0.49
VARS2-213ENST00000625423 SWSAP1Q6NVH7 229 aa12□□□□□ -0.49
VARS2-213ENST00000625423 VSTM1Q6UX27 236 aa12□□□□□ -0.49
VARS2-213ENST00000625423 ANKRD42Q8N9B4 389 aa12□□□□□ -0.49
VARS2-213ENST00000625423 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
VARS2-213ENST00000625423 WNK4Q96J92 1243 aa12□□□□□ -0.49
VARS2-213ENST00000625423 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
VARS2-213ENST00000625423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.49
VARS2-213ENST00000625423 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
VARS2-213ENST00000625423 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12□□□□□ -0.49
VARS2-213ENST00000625423 RIPK3Q9Y572 518 aa12□□□□□ -0.49
VARS2-213ENST00000625423 THAP12O43422 761 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 GARTP22102 1010 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 SLC1A1P43005 524 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 WNT7BP56706 349 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 PASD1Q8IV76 773 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 ATL2Q8NHH9 583 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 GRK7Q8WTQ7 553 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 FAM81BQ96LP2 452 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 C17orf75Q9HAS0 396 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 KCNK9Q9NPC2 374 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 XPNPEP1Q9NQW7 623 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 ZBED4O75132 1171 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.497e-22■■■■■ 33.3
VARS2-213ENST00000625423 STBD1O95210 358 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 TNNI1P19237 187 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 GJC1P36383 396 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 MTMR2Q13614 643 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 BRDTQ58F21 947 aaPredicted RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 WDR44Q5JSH3 913 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 C15orf39Q6ZRI6 1047 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 SYDE1Q6ZW31 735 aaPredicted RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 TRPM8Q7Z2W7 1104 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 FAM228AQ86W67 206 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 C11orf70Q9BRQ4 267 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 ABCF3Q9NUQ8 709 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 TPX2Q9ULW0 747 aaKnown RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 SNX3O60493 162 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 PROSCO94903 275 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 HLA-DRAP01903 254 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 NR3C2P08235 984 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 MYBL1P10243 752 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 MAN1A1P33908 653 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 CCDC91Q7Z6B0 441 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 PRUNE1Q86TP1 453 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 VSIG10LQ86VR7 867 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 TRAIPQ9BWF2 469 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 NINJ2Q9NZG7 142 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
VARS2-213ENST00000625423 SLC12A4Q9UP95 1085 aa11.99□□□□□ -0.49
VARS2-213ENST00000625423 CYP1A1P04798 512 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 RDXP35241 583 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 ACOT2P49753 483 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 TAS2R40P59535 323 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 CENPCQ03188 943 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 TDRD10Q5VZ19 366 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 HIBCHQ6NVY1 386 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 MON1BQ7L1V2 547 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 CYP4X1Q8N118 509 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ATG4CQ96DT6 458 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 USTQ9Y2C2 406 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 CCND2P30279 289 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 DSG3P32926 999 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 PIK3CAP42336 1068 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 LIG4P49917 911 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 NLRP11P59045 1033 aaKnown RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 KLF1Q13351 362 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 MPP2Q14168 576 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ZNF677Q86XU0 584 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 GDAP1Q8TB36 358 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 TRIM11Q96F44 468 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 POLR3FQ9H1D9 316 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 VWA5AO00534 786 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 EXTL3O43909 919 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 DGAT1O75907 488 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 GJB6O95452 261 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 GH1P01241 217 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms