RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TUSC3Q13454 348 aa23.03■■□□□ 1.28
PMPCA-212ENST00000622209 TDGQ13569 410 aa23.03■■□□□ 1.28
PMPCA-212ENST00000622209 PRSS55Q6UWB4 352 aaPredicted RBP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 TMEM105Q8N8V8 129 aa23.03■■□□□ 1.28
PMPCA-212ENST00000622209 FSIP1Q8NA03 581 aa23.03■■□□□ 1.28
PMPCA-212ENST00000622209 SMG7Q92540 1137 aaKnown RBP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 ATOH1Q92858 354 aaPredicted RBP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 MRPL44Q9H9J2 332 aaKnown RBP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 WDR6Q9NNW5 1121 aaKnown RBP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.03■■□□□ 1.28
PMPCA-212ENST00000622209 SERTAD1Q9UHV2 236 aa23.03■■□□□ 1.28
PMPCA-212ENST00000622209 GOLGA6L4A6NEF3 574 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 PTGESO14684 152 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 ACTN4O43707 911 aaKnown RBP23.02■■□□□ 1.28
PMPCA-212ENST00000622209 N4BP1O75113 896 aaKnown RBP23.02■■□□□ 1.28
PMPCA-212ENST00000622209 MCF2P10911 925 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 MPZL3Q6UWV2 235 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 ZNF707Q96C28 371 aaPredicted RBP23.02■■□□□ 1.28
PMPCA-212ENST00000622209 HVCN1Q96D96 273 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 TCHPQ9BT92 498 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 PIDD1Q9HB75 910 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 FNIP2Q9P278 1114 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
PMPCA-212ENST00000622209 RECQL4O94761 1208 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 PIGRP01833 764 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 THP07101 528 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 ASIC1P78348 528 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 ALCAMQ13740 583 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 ZNF568Q3ZCX4 644 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 RTP2Q5QGT7 225 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 ASTLQ6HA08 431 aaPredicted RBP23.01■■□□□ 1.27
PMPCA-212ENST00000622209 LILRA6Q6PI73 481 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 CYP26C1Q6V0L0 522 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 CEP57Q86XR8 500 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 FLCNQ8NFG4 579 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 HDAC7Q8WUI4 952 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 RSAD2Q8WXG1 361 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 BICD1Q96G01 975 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 STRA6Q9BX79 667 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 CDT1Q9H211 546 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 PLEKHA4Q9H4M7 779 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 PCDHB13Q9Y5F0 798 aa23.01■■□□□ 1.27
PMPCA-212ENST00000622209 SF3B1O75533 1304 aaKnown RBP eCLIP23.01■■□□□ 1.275e-6■■■□□ 18.8
PMPCA-212ENST00000622209 ABLIM1O14639 778 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 GALR2O43603 387 aaPredicted RBP23■■□□□ 1.27
PMPCA-212ENST00000622209 PPP1R37O75864 691 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 KIF4AO95239 1232 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 AFMP43652 599 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 FAM171A1Q5VUB5 890 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 MAP4K3Q8IVH8 894 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 PAGE5Q96GU1 130 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 CLUHO75153 1309 aa23■■□□□ 1.27
PMPCA-212ENST00000622209 PVALEFA0A1B0GWK0 134 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 CLDN3O15551 220 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 NARSO43776 548 aaKnown RBP22.99■■□□□ 1.27
PMPCA-212ENST00000622209 MYL1P05976 194 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 GRM5P41594 1212 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 LIG4P49917 911 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 NUBP1P53384 320 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 CREMQ03060 361 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 MCL1Q07820 350 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 ZC2HC1CQ53FD0 456 aaPredicted RBP22.99■■□□□ 1.27
PMPCA-212ENST00000622209 UNC13DQ70J99 1090 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 GPR65Q8IYL9 337 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 ZBTB45Q96K62 511 aaPredicted RBP22.99■■□□□ 1.27
PMPCA-212ENST00000622209 MYADMQ96S97 322 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 TTPALQ9BTX7 342 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 RHOBTB2Q9BYZ6 727 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 IRF2BPLQ9H1B7 796 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 GOLPH3LQ9H4A5 285 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 TBC1D7Q9P0N9 293 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 FBXL21Q9UKT6 434 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 MYO10Q9HD67 2058 aa22.99■■□□□ 1.27
PMPCA-212ENST00000622209 HNRNPDLO14979 420 aaKnown RBP22.98■■□□□ 1.27
PMPCA-212ENST00000622209 GCNT3O95395 438 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 NOLC1Q14978 699 aaKnown RBP eCLIP22.98■■□□□ 1.27
PMPCA-212ENST00000622209 NAB2Q15742 525 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 IPO9Q96P70 1041 aaKnown RBP22.98■■□□□ 1.27
PMPCA-212ENST00000622209 CCDC94Q9BW85 323 aaPredicted RBP22.98■■□□□ 1.27
PMPCA-212ENST00000622209 PRKD2Q9BZL6 878 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 BLZF1Q9H2G9 400 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 ZDHHC7Q9NXF8 308 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 IGSF9Q9P2J2 1179 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 DUSP12Q9UNI6 340 aa22.98■■□□□ 1.27
PMPCA-212ENST00000622209 ZFHX2Q9C0A1 2572 aaPredicted RBP22.97■■□□□ 1.27
PMPCA-212ENST00000622209 ZNF202O95125 648 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 C1RP00736 705 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 IGFBP6P24592 240 aaPredicted RBP22.97■■□□□ 1.27
PMPCA-212ENST00000622209 CUL4BQ13620 913 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 L1TD1Q5T7N2 865 aaKnown RBP22.97■■□□□ 1.27
PMPCA-212ENST00000622209 STXBP4Q6ZWJ1 553 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 SIX5Q8N196 739 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 LNX1Q8TBB1 728 aaPredicted RBP22.97■■□□□ 1.27
PMPCA-212ENST00000622209 ACCSQ96QU6 501 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 CLSTN3Q9BQT9 956 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 ANKFY1Q9P2R3 1169 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 EXOC7Q9UPT5 735 aa22.97■■□□□ 1.27
PMPCA-212ENST00000622209 ZMYND10O75800 440 aa22.96■■□□□ 1.27
PMPCA-212ENST00000622209 NPR3P17342 541 aa22.96■■□□□ 1.27
PMPCA-212ENST00000622209 MATR3P43243 847 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms