RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 SPAG7O75391 227 aa14.07□□□□□ -0.16
SIRPA-204ENST00000622179 BRD2P25440 801 aaKnown RBP14.07□□□□□ -0.16
SIRPA-204ENST00000622179 P3H1Q32P28 736 aa14.07□□□□□ -0.16
SIRPA-204ENST00000622179 PHLDB3Q6NSJ2 640 aa14.07□□□□□ -0.16
SIRPA-204ENST00000622179 PRMT1Q99873 361 aaKnown RBP14.07□□□□□ -0.16
SIRPA-204ENST00000622179 SENP7Q9BQF6 1050 aa14.07□□□□□ -0.16
SIRPA-204ENST00000622179 A0A0A6YYK5 440 aaPredicted RBP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 ATP9AO75110 1047 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 NOL4O94818 638 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 ATP8B4Q8TF62 1192 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 ATP2A3Q93084 1043 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 FAF2Q96CS3 445 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 F5H423 210 aaPredicted RBP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 CPP00450 1065 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 PGK2P07205 417 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 CAV1Q03135 178 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 NFX1Q12986 1120 aaKnown RBP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 HGSNATQ68CP4 663 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 GPAT2Q6NUI2 795 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 BTNL9Q6UXG8 535 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 ANKMY2Q8IV38 441 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 PCK1P35558 622 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 ARL4CP56559 192 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 CYP4A22Q5TCH4 519 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 PRPF31Q8WWY3 499 aaKnown RBP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
SIRPA-204ENST00000622179 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
SIRPA-204ENST00000622179 YDJCA8MPS7 323 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 RASSF2P50749 326 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 IRX4P78413 519 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 PDE1BQ01064 536 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ORC1Q13415 861 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 FOXR1Q6PIV2 292 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 HVCN1Q96D96 273 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 KIAA0391O15091 583 aaKnown RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 GZMAP12544 262 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ITGA8P53708 1063 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 CUL2Q13617 745 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ZNF449Q6P9G9 518 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 CAVIN3Q969G5 261 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 AGAP1Q9UPQ3 857 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 GRAP2O75791 330 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 KRT7P08729 469 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 TRADDQ15628 312 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 SGSM1Q2NKQ1 1148 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ZNF662Q6ZS27 426 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 HACE1Q8IYU2 909 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 C1orf131Q8NDD1 294 aaKnown RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 PARD3BQ8TEW8 1205 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 RPS6KC1Q96S38 1066 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 TRAIPQ9BWF2 469 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 LRRC4Q9HBW1 653 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ASNSD1Q9NWL6 643 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 SNED1Q8TER0 1413 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■■■□ 21.8
SIRPA-204ENST00000622179 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 ARL4AP40617 200 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 PRKCIP41743 596 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 CDH6P55285 790 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 LNX1Q8TBB1 728 aaPredicted RBP14.05□□□□□ -0.16
SIRPA-204ENST00000622179 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
SIRPA-204ENST00000622179 MEFVO15553 781 aaPredicted RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 STAMBPO95630 424 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 ITIH2P19823 946 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 CA8P35219 290 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 RGS7P49802 495 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 TMEM62Q0P6H9 643 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 SMAD1Q15797 465 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 C1orf228Q6PIY5 440 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 KRT35Q92764 455 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 ACTR5Q9H9F9 607 aaPredicted RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 XPOTO43592 962 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 CNTN2Q02246 1040 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 MYBPC2Q14324 1141 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 ZCWPW2Q504Y3 356 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 ZBTB45Q96K62 511 aaPredicted RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 PABPC3Q9H361 631 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 MAP3K20Q9NYL2 800 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 KRT10P13645 584 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 AP3M2P53677 418 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 CLNS1AP54105 237 aaKnown RBP14.04□□□□□ -0.16
SIRPA-204ENST00000622179 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 PTGISQ16647 500 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 EFCAB12Q6NXP0 572 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 TTC13Q8NBP0 860 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 PRDM4Q9UKN5 801 aa14.04□□□□□ -0.16
SIRPA-204ENST00000622179 RPSAP08865 295 aaKnown RBP14.03□□□□□ -0.16
SIRPA-204ENST00000622179 PYGMP11217 842 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms