RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRPC5OSA6NMA1 111 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 E5RI56 91 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 KRT31Q15323 416 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 FAM173BQ6P4H8 233 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SEC16BQ96JE7 1060 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 VPS11Q9H270 941 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 ELP3Q9H9T3 547 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 USE1Q9NZ43 259 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 FBXL5Q9UKA1 691 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 USP6P35125 1406 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 LGALS16A8MUM7 142 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TCP11X1B4DZS4 312 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 RNF103O00237 685 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PALMO75781 387 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 GDF11O95390 407 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CXCR5P32302 372 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 IL13P35225 146 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TGFBR2P37173 567 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SLC10A5Q5PT55 438 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 LMBRD2Q68DH5 695 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SDE2Q6IQ49 451 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 IYDQ6PHW0 289 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 NKX2-3Q8TAU0 364 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CARD14Q9BXL6 1004 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 AP1M1Q9BXS5 423 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 UBE2TQ9NPD8 197 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SH3GLB2Q9NR46 395 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 RGL1Q9NZL6 768 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 STOML2Q9UJZ1 356 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 HPCAL4Q9UM19 191 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SCP2P22307 547 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 STAT5AP42229 794 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 STAT5BP51692 787 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 GRAPQ13588 217 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 KYNUQ16719 465 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SPICE1Q8N0Z3 855 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 AHI1Q8N157 1196 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TMEM35BQ8NCS4 154 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SHCBP1Q8NEM2 672 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 GRAPLQ8TC17 118 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CAAP1Q9H8G2 361 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CYP4F11Q9HBI6 524 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PSMC3IPQ9P2W1 217 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CPA1P15085 419 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 NCKAP1LP55160 1127 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 DPCR1Q3MIW9 517 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 NFRKBQ6P4R8 1299 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 APPL2Q8NEU8 664 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 GJA10Q969M2 543 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TMEM165Q9HC07 324 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 RIC8BQ9NVN3 520 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 IMPAD1Q9NX62 359 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 KLHL3Q9UH77 587 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 MAD2L2Q9UI95 211 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PIK3R1P27986 724 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TYK2P29597 1187 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 HADHAP40939 763 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 ARMC4Q5T2S8 1044 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 ANKARQ7Z5J8 1434 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC36Q8IYA8 594 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PACSIN1Q9BY11 444 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 TUFT1Q9NNX1 390 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SETD1BQ9UPS6 1966 aaKnown RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PZPP20742 1482 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF532Q9HCE3 1301 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 PLXNC1O60486 1568 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ABL2P42684 1182 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SESN2P58004 480 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 EIF2B5Q13144 721 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RUNDC3AQ59EK9 446 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 BEST2Q8NFU1 509 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 WDR48Q8TAF3 677 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 FAM149B1Q96BN6 582 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SPRTNQ9H040 489 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 TRABDQ9H4I3 376 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RPAP3Q9H6T3 665 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ADD3Q9UEY8 706 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RPAP1Q9BWH6 1393 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CA12O43570 354 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ICA1Q05084 483 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 TBL3Q12788 808 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CUL4AQ13619 759 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 THOC7Q6I9Y2 204 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 C16orf62Q7Z3J2 963 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RHOT1Q8IXI2 618 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SRPK1Q96SB4 655 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CEP44Q9C0F1 390 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 NOD2Q9HC29 1040 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 KMT5AQ9NQR1 393 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms