RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 FAM26FQ5R3K3 315 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 IRF2BP2Q7Z5L9 587 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 CACNA2D3Q8IZS8 1091 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 C7orf31Q8N865 590 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 TATDN2Q93075 761 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 TLCD1Q96CP7 247 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 RAD9AQ99638 391 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 FAM129AQ9BZQ8 928 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 SLC40A1Q9NP59 571 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 EHD2Q9NZN4 543 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 MCM8Q9UJA3 840 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
RABGAP1-213ENST00000616002 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 MYO1FO00160 1098 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 GPR37L1O60883 481 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 GJB5O95377 273 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 SNHG28P0DPA3 235 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 CTNNA1P35221 906 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 TXKP42681 527 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 IFT88Q13099 833 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 SNCBQ16143 134 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 DGKDQ16760 1214 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 LY6KQ17RY6 165 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 ASPRV1Q53RT3 343 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 DPY19L2P1Q6NXN4 242 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 NSUN6Q8TEA1 469 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 TGS1Q96RS0 853 aaKnown RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 NAP1L3Q99457 506 aaPredicted RBP11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 TMEM109Q9BVC6 243 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 TXLNGYQ9BZA5 131 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 KCTD10Q9H3F6 313 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 CCDC134Q9H6E4 229 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 SMARCAL1Q9NZC9 954 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 BRWD1Q9NSI6 2320 aa11.9□□□□□ -0.5
RABGAP1-213ENST00000616002 CETN3O15182 167 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 ASAP2O43150 1006 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 NBNO60934 754 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 EFCAB14O75071 495 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 PPFIA2O75334 1257 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 FTCDO95954 541 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 CXCL10P02778 98 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 NUDT17P0C025 328 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 GOLGA8HP0CJ92 632 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 CKBP12277 381 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 GUCY2FP51841 1108 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 ARHGAP1Q07960 439 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 RIPK1Q13546 671 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 BYSLQ13895 437 aaKnown RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 IKBKEQ14164 716 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 ITIH4Q14624 930 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 GPNMBQ14956 572 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 STXBP2Q15833 593 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 SKIDA1Q1XH10 827 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 GKAP1Q5VSY0 366 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 TTC19Q6DKK2 380 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 HOOK3Q86VS8 718 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 SNX29Q8TEQ0 813 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 PGM2Q96G03 612 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 PSMB7Q99436 277 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 KATNAL1Q9BW62 490 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 MAF1Q9H063 256 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 RAB17Q9H0T7 212 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 METTL14Q9HCE5 456 aaKnown RBP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 GTF2IRD1Q9UHL9 959 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
RABGAP1-213ENST00000616002 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 FAM187AA6NFU0 413 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 KCNK3O14649 394 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 MGRN1O60291 552 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 ADCY7P51828 1080 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 SEC24CP53992 1094 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 ERVK-21P61565 698 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 HLTFQ14527 1009 aaKnown RBP eCLIP11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
RABGAP1-213ENST00000616002 ERMARDQ5T6L9 678 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms