RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 MYH7BA7E2Y1 1941 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 SMNDC1O75940 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDH5-208ENST00000614547 ADRA1DP25100 572 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 BLMHQ13867 455 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 STAT4Q14765 748 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 PCNX4Q63HM2 1172 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 CASC4Q6P4E1 433 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 GRAMD1AQ96CP6 724 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 R3HDM2Q9Y2K5 976 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 DAGLAQ9Y4D2 1042 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 TOM1L1O75674 476 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 VHLP40337 213 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 NPEPPSP55786 919 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 BTKQ06187 659 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 KIF22Q14807 665 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 RFWD3Q6PCD5 774 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CBWD2Q8IUF1 395 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 RAB3IL1Q8TBN0 382 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 A0A1W2PPM1 405 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 TGFB1I1O43294 461 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 PPP3CAQ08209 521 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 TMED1Q13445 227 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 MTFR1Q15390 333 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 ATP13A4Q4VNC1 1196 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CENPUQ71F23 418 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 SDCCAG8Q86SQ7 713 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 ACCSQ96QU6 501 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 TEKT3Q9BXF9 490 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 MYH7P12883 1935 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 E2F8A0AVK6 867 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 GH2P01242 217 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 POLR2MP0CAP2 368 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 TAC1P20366 129 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 RIPK1Q13546 671 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CYFIP1Q7L576 1253 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CEP70Q8NHQ1 597 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 B4GALNT2Q8NHY0 566 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 CALN1Q9BXU9 219 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 EHMT1Q9H9B1 1298 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 PCSK1NQ9UHG2 260 aa12.47□□□□□ -0.41
CDH5-208ENST00000614547 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
CDH5-208ENST00000614547 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.41
CDH5-208ENST00000614547 O00370 1275 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 MAP3K6O95382 1288 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 SERPINB3P29508 390 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 SSTR1P30872 391 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 PTGIRP43119 386 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 NFIAQ12857 509 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 LRRC6Q86X45 466 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 CCNJLQ8IV13 435 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 BBOF1Q8ND07 529 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.46□□□□□ -0.41
CDH5-208ENST00000614547 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 TSSK1BQ9BXA7 367 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 SIX2Q9NPC8 291 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 HSPBP1Q9NZL4 362 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 DISP2A7MBM2 1401 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 LPXNO60711 386 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 RXRBP28702 533 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 PHBP35232 272 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 SMTNL2Q2TAL5 461 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 USP37Q86T82 979 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 AGR3Q8TD06 166 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 FAM111AQ96PZ2 611 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 CHMP2BQ9UQN3 213 aa12.46□□□□□ -0.41
CDH5-208ENST00000614547 CCDC22O60826 627 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 PRKG1Q13976 671 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 KHDC1Q4VXA5 237 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms