RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 CCDC51Q96ER9 411 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
SRSF3-204ENST00000613941 MSANTD3Q96H12 275 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 HHIPQ96QV1 700 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
SRSF3-204ENST00000613941 C8orf33Q9H7E9 229 aaPredicted RBP11.67□□□□□ -0.54
SRSF3-204ENST00000613941 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
SRSF3-204ENST00000613941 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 BCLAF3A2AJT9 711 aaKnown RBP11.66□□□□□ -0.54
SRSF3-204ENST00000613941 PTGESO14684 152 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 ZNF197O14709 1029 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 SEC24AO95486 1093 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 PRB1P04280 392 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 CAPNS1P04632 268 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 FGFR3P22607 806 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 AXLP30530 894 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 ARPP19P56211 112 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 ROR1Q01973 937 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 EMC2Q15006 297 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 TEAD2Q15562 447 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 ELF2Q15723 593 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 AMHR2Q16671 573 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 RTN1Q16799 776 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 PDXDC1Q6P996 788 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 APOA5Q6Q788 366 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 RDM1Q8NG50 284 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 HNRNPLLQ8WVV9 542 aaKnown RBP11.66□□□□□ -0.54
SRSF3-204ENST00000613941 CEP170P1Q96L14 293 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 DHX33Q9H6R0 707 aaKnown RBP11.66□□□□□ -0.54
SRSF3-204ENST00000613941 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
SRSF3-204ENST00000613941 WRAP73Q9P2S5 460 aaPredicted RBP11.66□□□□□ -0.54
SRSF3-204ENST00000613941 SLC8A2Q9UPR5 921 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 INVSQ9Y283 1065 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 INSL5Q9Y5Q6 135 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 PLXND1Q9Y4D7 1925 aa11.66□□□□□ -0.54
SRSF3-204ENST00000613941 HELZP42694 1942 aaKnown RBP11.65□□□□□ -0.54
SRSF3-204ENST00000613941 CCDC163A0A0D9SF12 145 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 CHADO15335 359 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 AKAP3O75969 853 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
SRSF3-204ENST00000613941 GBP1P32455 592 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 ELF1P32519 619 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 MLLT6P55198 1093 aaPredicted RBP11.65□□□□□ -0.54
SRSF3-204ENST00000613941 PTENP60484 403 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 PSMC5P62195 406 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 TNK2Q07912 1038 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 SPIRE1Q08AE8 756 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.54
SRSF3-204ENST00000613941 NAB2Q15742 525 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 B3GNT9Q6UX72 402 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 SGMS1Q86VZ5 419 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.54
SRSF3-204ENST00000613941 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 LRIG1Q96JA1 1093 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
SRSF3-204ENST00000613941 URB1O60287 2271 aaKnown RBP11.65□□□□□ -0.55
SRSF3-204ENST00000613941 KALRNO60229 2985 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 ESYT2A0FGR8 921 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 EML1O00423 815 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
SRSF3-204ENST00000613941 TDP2O95551 362 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 CDC27P30260 824 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 BRCC3P46736 316 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 IRX4P78413 519 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 SIM1P81133 766 aaPredicted RBP11.64□□□□□ -0.55
SRSF3-204ENST00000613941 SCAPQ12770 1279 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
SRSF3-204ENST00000613941 STXBP5Q5T5C0 1151 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 CYP4A22Q5TCH4 519 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 C1orf228Q6PIY5 440 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 RTL10Q7L3V2 364 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 TCEANC2Q96MN5 208 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 C6orf50Q9HD87 102 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 CEP72Q9P209 647 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
SRSF3-204ENST00000613941 GOLGA8AA7E2F4 631 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 MICAL2O94851 1124 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 THP07101 528 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 CHMLP26374 656 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 RFC5P40937 340 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 MAPK8P45983 427 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
SRSF3-204ENST00000613941 FCHO2Q0JRZ9 810 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 TWF1Q12792 350 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 CAPSQ13938 189 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
SRSF3-204ENST00000613941 SYNPOQ8N3V7 929 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms