RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LRRC41Q15345 812 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 KRT79Q5XKE5 535 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 ANO7Q6IWH7 933 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 MTHFD1LQ6UB35 978 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 EEPD1Q7L9B9 569 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 CKAP2Q8WWK9 683 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 DNAJC19Q96DA6 116 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 TMEM237Q96Q45 408 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 EHMT1Q9H9B1 1298 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 FGFR1OP2Q9NVK5 253 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 GRHL1Q9NZI5 618 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 TCP11X1B4DZS4 312 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 RIPK2O43353 540 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 NR3C2P08235 984 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 CHRNA3P32297 505 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 PRKCZQ05513 592 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 CALCRLQ16602 461 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 PRR16Q569H4 304 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 FRMD5Q7Z6J6 570 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 ENDOVQ8N8Q3 282 aaKnown RBP23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 GJA10Q969M2 543 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 BMP2KQ9NSY1 1161 aaPredicted RBP23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 KLHL14Q9P2G3 628 aa23.39■■□□□ 1.33
POLR2J3-220ENST00000613744 DPPA5A6NC42 116 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 PHF2O75151 1096 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 SMIM24O75264 130 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 ENOX2Q16206 610 aaKnown RBP23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 CCL14Q16627 93 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 KIF2BQ8N4N8 673 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 FITM2Q8N6M3 262 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 FBXO25Q8TCJ0 367 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 CRYGNQ8WXF5 182 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 RFFLQ8WZ73 363 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 SERPINB12Q96P63 405 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 LRMDAQ9H2I8 198 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 PCYOX1Q9UHG3 505 aa23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.38■■□□□ 1.33
POLR2J3-220ENST00000613744 FAM86B1E9PN63 330 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 CETN3O15182 167 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 SLC26A4O43511 780 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 MARCH6O60337 910 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 GGPS1O95749 300 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 FAM86B2P0C5J1 330 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 CDC25CP30307 473 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 TXKP42681 527 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 PTGIRP43119 386 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 FLT3LGP49771 235 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 MRPS9P82933 396 aaKnown RBP23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 MXRA7P84157 204 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 TRMT10CQ7L0Y3 403 aaKnown RBP23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 EXOC3L1Q86VI1 746 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 DNERQ8NFT8 737 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 STK32AQ8WU08 396 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 INPP5DQ92835 1189 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 FAM167BQ9BTA0 163 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 HTTP42858 3142 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 PLXNA1Q9UIW2 1896 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 EYA4O95677 639 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 TMEM253P0C7T8 217 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 GNAT1P11488 350 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 TSNAXIP1Q2TAA8 658 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 CCDC65Q8IXS2 484 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 DRAXINQ8NBI3 349 aaPredicted RBP23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
POLR2J3-220ENST00000613744 ALDH3A1P30838 453 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 NUGGCQ68CJ6 796 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 EPS8L3Q8TE67 593 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 USP6NLQ92738 828 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 MAML3Q96JK9 1138 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 KCTD10Q9H3F6 313 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 SEMA4AQ9H3S1 761 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 SNX24Q9Y343 169 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 AFPP02771 609 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 JAM2P57087 298 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 WASHC2DQ5SRD0 308 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 GLIS3Q8NEA6 775 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 SNX29Q8TEQ0 813 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 PIGOQ8TEQ8 1089 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 TEKT4Q8WW24 435 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 NAP1L4Q99733 375 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 VCXQ9H320 206 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 FRMPD4Q14CM0 1322 aa23.36■■□□□ 1.33
POLR2J3-220ENST00000613744 LMNAP02545 664 aaKnown RBP23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 RGS2P41220 211 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 PCNX4Q63HM2 1172 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 CYFIP1Q7L576 1253 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 SOCS4Q8WXH5 440 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 MAF1Q9H063 256 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 NR2E1Q9Y466 385 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 PCDHA2Q9Y5H9 948 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 SYNGAP1Q96PV0 1343 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 MCM3APO60318 1980 aa23.35■■□□□ 1.33
POLR2J3-220ENST00000613744 SMIM23A6NLE4 172 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 DDX3XO00571 662 aaKnown RBP eCLIP23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 CCND2P30279 289 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 PCK1P35558 622 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 KLC1Q07866 573 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 ADAM9Q13443 819 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms