RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 POU5F1Q01860 360 aaKnown RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 PTK2Q05397 1052 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 KIF5AQ12840 1032 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 TRIM32Q13049 653 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 PCBP1Q15365 356 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ENOX2Q16206 610 aaKnown RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 SLC18A3Q16572 532 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 KYAT1Q16773 422 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ARHGAP44Q17R89 818 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 MSS51Q4VC12 460 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 SEZ6Q53EL9 994 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 BRICD5Q6PL45 260 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 VPS36Q86VN1 386 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ARHGEF19Q8IW93 802 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 NME8Q8N427 588 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 JAKMIP2Q96AA8 810 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 NT5C1BQ96P26 610 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 IFIH1Q9BYX4 1025 aaKnown RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 GCOM2Q9BZD3 368 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 TSGA10Q9BZW7 698 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 GPR88Q9GZN0 384 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ADAMTS10Q9H324 1103 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 LUC7LQ9NQ29 371 aaKnown RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 HDAC6Q9UBN7 1215 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 DNAI1Q9UI46 699 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 TRIP12Q14669 1992 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-207ENST00000612558 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 GPR25O00155 361 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 FOXN3O00409 490 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 TREHO43280 583 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 GPR32O75388 356 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 CSDE1O75534 798 aaKnown RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ERLIN2O94905 339 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 HMGCRP04035 888 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ELNP15502 786 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ARF4P18085 180 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 HOXC8P31273 242 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 MAGEA1P43355 309 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 WNT7BP56706 349 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 GFPT1Q06210 699 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ARHGEF6Q15052 776 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 KIZQ2M2Z5 673 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 CCDC122Q5T0U0 273 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 C10orf76Q5T2E6 689 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 TDRD10Q5VZ19 366 aaKnown RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 EEF1DP3Q658K8 133 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 LMBRD2Q68DH5 695 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ENOSF1Q7L5Y1 443 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF571Q7Z3V5 609 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 THNSL1Q8IYQ7 743 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 PPM1KQ8N3J5 372 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 SNIP1Q8TAD8 396 aaKnown RBP9.61□□□□□ -0.87
CCDC47-207ENST00000612558 HELQQ8TDG4 1101 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 CDT1Q9H211 546 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 PDZD7Q9H5P4 517 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 ADAMTS1Q9UHI8 967 aa9.61□□□□□ -0.87
CCDC47-207ENST00000612558 PJA2O43164 708 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 B4GALT4O60513 344 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 TSPAN1O60635 241 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 ADAMTS4O75173 837 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 IL18RAPO95256 599 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 ABL1P00519 1130 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 PGK1P00558 417 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 HLA-DRAP01903 254 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 CLTAP09496 248 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 CCND3P30281 292 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 CASQ1P31415 396 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF200P98182 395 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 GCNT1Q02742 428 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 BIRC3Q13489 604 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 RUFY4Q6ZNE9 571 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 CDR2LQ86X02 465 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 RAET1EQ8TD07 263 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 PPP1R13LQ8WUF5 828 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 DNAJB3Q8WWF6 145 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 ERO1AQ96HE7 468 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 WDR24Q96S15 920 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 LACRTQ9GZZ8 138 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 RPF1Q9H9Y2 349 aaKnown RBP9.6□□□□□ -0.87
CCDC47-207ENST00000612558 XPNPEP3Q9NQH7 507 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 GUCA1BQ9UMX6 200 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 SCN10AQ9Y5Y9 1956 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
CCDC47-207ENST00000612558 A0A087X0T9 212 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 PHACTR2O75167 634 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms