RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 A0A087WV48 116 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FAM86B1E9PN63 330 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IPO5O00410 1097 aaKnown RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CHADO15335 359 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NR1I2O75469 434 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PSAPP07602 524 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FAM86B2P0C5J1 330 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ITGA4P13612 1032 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MLH1P40692 756 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KPNA1P52294 538 aaPredicted RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PTH1RQ03431 593 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TRDNQ13061 729 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZNF423Q2M1K9 1284 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PDXDC1Q6P996 788 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SMAP1Q8IYB5 467 aaPredicted RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CAMKK1Q8N5S9 505 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LSM14AQ8ND56 463 aaKnown RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CNNM3Q8NE01 707 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CSGALNACT1Q8TDX6 532 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ADAMTS14Q8WXS8 1223 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 RSPRY1Q96DX4 576 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PAAF1Q9BRP4 392 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 APOL6Q9BWW8 343 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LSG1Q9H089 658 aaKnown RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ANO2Q9NQ90 1003 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 WDR70Q9NW82 654 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CACNG4Q9UBN1 327 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 DKK4Q9UBT3 224 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SEC63Q9UGP8 760 aaKnown RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 EVLQ9UI08 416 aaPredicted RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SLC8A2Q9UPR5 921 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IPPQ9Y573 584 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TENM4Q6N022 2769 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GON4LQ3T8J9 2241 aa8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PTPRBP23467 1997 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ARHGEF37A1IGU5 675 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HEPACAM2A8MVW5 462 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TADA2AO75478 443 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 STBD1O95210 358 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 OR1D2P34982 312 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PRKCEQ02156 737 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NECTIN1Q15223 517 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TSGA10IPQ3SY00 556 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FAM171A1Q5VUB5 890 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PMS2CLQ68D20 193 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PLA2G4DQ86XP0 818 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 RHPN2Q8IUC4 686 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SRBD1Q8N5C6 995 aaKnown RBP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MAP3K14Q99558 947 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MTA3Q9BTC8 594 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 EIF2AQ9BY44 585 aaKnown RBP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NIFKQ9BYG3 293 aaKnown RBP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MINDY3Q9H8M7 445 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TBC1D22BQ9NU19 505 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SUCLA2Q9P2R7 463 aaPredicted RBP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HES2Q9Y543 173 aa8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 RBM8AQ9Y5S9 174 aaKnown RBP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SF3B1O75533 1304 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KIF26AQ9ULI4 1882 aaPredicted RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FREM2Q5SZK8 3169 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZNF197O14709 1029 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IFIT3O14879 490 aaKnown RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ATG13O75143 517 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FOSP01100 380 aaPredicted RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CYP21A2P08686 494 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SREBF1P36956 1147 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SPIRE1Q08AE8 756 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FCHO2Q0JRZ9 810 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LMAN2Q12907 356 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KRT32Q14532 448 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HSP90AA2PQ14568 343 aaPredicted RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KARSQ15046 597 aaKnown RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 UGCGQ16739 394 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TSR1Q2NL82 804 aaKnown RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CEP57Q86XR8 500 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SCUBE3Q8IX30 993 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NCOA7Q8NI08 942 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TTC8Q8TAM2 541 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZSCAN18Q8TBC5 510 aaPredicted RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CRYGNQ8WXF5 182 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NLRP4Q96MN2 994 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LRRC3BQ96PB8 259 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HHIPQ96QV1 700 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CORO1BQ9BR76 489 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ANO3Q9BYT9 981 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CLMPQ9H6B4 373 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SNTG2Q9NY99 539 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GTSE1Q9NYZ3 720 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 EBF1Q9UH73 591 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TSR3Q9UJK0 312 aaKnown RBP8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GIT1Q9Y2X7 761 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CELSR3Q9NYQ7 3312 aa8□□□□□ -1.13
PTCHD3P1-201ENST00000612350 hCG_1642624A0A1W2PR95 340 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMEM150BA6NC51 233 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PLEKHA8P1O95397 391 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HMGB1P09429 215 aaKnown RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GJA1P17302 382 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LAMA1P25391 3075 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GBP1P32455 592 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HSPA4P34932 840 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms