RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 MAN1C1Q9NR34 630 aa18.72■□□□□ 0.59
HERC3-214ENST00000601319 PCDHB13Q9Y5F0 798 aa18.72■□□□□ 0.59
HERC3-214ENST00000601319 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
HERC3-214ENST00000601319 ANKRD63C9JTQ0 380 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 PI4K2BG5E9Z4 385 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 GCNT3O95395 438 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 CYP3A5P20815 502 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 LRPAP1P30533 357 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 CASP5P51878 434 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 ZBTB41Q5SVQ8 909 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 LILRA6Q6PI73 481 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 PRSS55Q6UWB4 352 aaPredicted RBP18.71■□□□□ 0.59
HERC3-214ENST00000601319 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 GPR149Q86SP6 731 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 LEO1Q8WVC0 666 aaPredicted RBP18.71■□□□□ 0.59
HERC3-214ENST00000601319 ACCSQ96QU6 501 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 C1QTNF1Q9BXJ1 281 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 RPF1Q9H9Y2 349 aaKnown RBP18.71■□□□□ 0.59
HERC3-214ENST00000601319 MTRRQ9UBK8 725 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 TUBGCP4Q9UGJ1 667 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 UBQLN1Q9UMX0 589 aaKnown RBP18.71■□□□□ 0.59
HERC3-214ENST00000601319 DERAQ9Y315 318 aa18.71■□□□□ 0.59
HERC3-214ENST00000601319 TISP43B9A030 160 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
HERC3-214ENST00000601319 XPOTO43592 962 aaKnown RBP18.7■□□□□ 0.58
HERC3-214ENST00000601319 IGFBP6P24592 240 aaPredicted RBP18.7■□□□□ 0.58
HERC3-214ENST00000601319 POSTNQ15063 836 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 ADALQ6DHV7 355 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 C12orf76Q8N812 135 aaPredicted RBP18.7■□□□□ 0.58
HERC3-214ENST00000601319 STAMQ92783 540 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 KIF12Q96FN5 646 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 C7orf25Q9BPX7 421 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 CLSTN3Q9BQT9 956 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 POMKQ9H5K3 350 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 AGO2Q9UKV8 859 aaKnown RBP18.7■□□□□ 0.58
HERC3-214ENST00000601319 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
HERC3-214ENST00000601319 SCN1AP35498 2009 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 LACTBL1A8MY62 500 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 SYN3O14994 580 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 TGM5O43548 720 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 DCXO43602 365 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 MYBP10242 640 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ALADP13716 330 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ADSSP30520 456 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ASIC1P78348 528 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 KCNA1Q09470 495 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ATAT1Q5SQI0 421 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 TMC5Q6UXY8 1006 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ANKS3Q6ZW76 656 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 CEP57Q86XR8 500 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 RNF135Q8IUD6 432 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 POMGNT1Q8WZA1 660 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 SUSD3Q96L08 255 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 SPATA32Q96LK8 384 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 FGFBP2Q9BYJ0 223 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ASB7Q9H672 318 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 TMEM206Q9H813 350 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 ZDHHC7Q9NXF8 308 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 CDH22Q9UJ99 828 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 FBXW11Q9UKB1 542 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 KCNH3Q9ULD8 1083 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 NR2E1Q9Y466 385 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 DOCK8Q8NF50 2099 aa18.69■□□□□ 0.58
HERC3-214ENST00000601319 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 EIF3DO15371 548 aaKnown RBP eCLIP18.68■□□□□ 0.58
HERC3-214ENST00000601319 RPL17P18621 184 aaKnown RBP18.68■□□□□ 0.58
HERC3-214ENST00000601319 GARTP22102 1010 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 CMA1P23946 247 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 TKTP29401 623 aaKnown RBP18.68■□□□□ 0.58
HERC3-214ENST00000601319 BRCC3P46736 316 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.58
HERC3-214ENST00000601319 EHHADHQ08426 723 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 PALB2Q86YC2 1186 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 SCAND2PQ9GZW5 306 aaPredicted RBP18.68■□□□□ 0.58
HERC3-214ENST00000601319 IKZF4Q9H2S9 585 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 EPHX3Q9H6B9 360 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 C2CD2Q9Y426 696 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 NUB1Q9Y5A7 615 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 UBE4BO95155 1302 aa18.68■□□□□ 0.58
HERC3-214ENST00000601319 I3L4J1 428 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 SLFN14P0C7P3 912 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 PAX3P23760 479 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 ACOT2P49753 483 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 SPAG1Q07617 926 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 RAB33AQ14088 237 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 SPATA1Q5VX52 437 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 JADE1Q6IE81 842 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 KANK3Q6NY19 840 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 CRELD2Q6UXH1 353 aaPredicted RBP18.67■□□□□ 0.58
HERC3-214ENST00000601319 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 EPM2AIP1Q7L775 607 aaPredicted RBP18.67■□□□□ 0.58
HERC3-214ENST00000601319 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 USP25Q9UHP3 1055 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 HPSEQ9Y251 543 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
HERC3-214ENST00000601319 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
HERC3-214ENST00000601319 M0QZQ0 153 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms