RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 URGCPQ8TCY9 931 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 HERVK_113Q902F9 699 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 TOP1MTQ969P6 601 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
SNRPA-202ENST00000596860 IMPG2Q9BZV3 1241 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
SNRPA-202ENST00000596860 RAB20Q9NX57 234 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
SNRPA-202ENST00000596860 ANO9A1A5B4 782 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TMEM189-UBE2V1I3L0A0 370 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 PTGESO14684 152 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TEX33O43247 280 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 ASS1P00966 412 aaKnown RBP9.46□□□□□ -0.9
SNRPA-202ENST00000596860 FGBP02675 491 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 NFICP08651 508 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TPM1P09493 284 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
SNRPA-202ENST00000596860 PON1P27169 355 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 GCLMP48507 274 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 WNT7BP56706 349 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 OSTNP61366 133 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 GCNT1Q02742 428 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 KCNMA1Q12791 1236 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TRPC3Q13507 836 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 NAB2Q15742 525 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 SEZ6Q53EL9 994 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 NOMO2Q5JPE7 1267 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TDRD10Q5VZ19 366 aaKnown RBP9.46□□□□□ -0.9
SNRPA-202ENST00000596860 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 CXorf38Q8TB03 319 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 DPF3Q92784 378 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF560Q96MR9 790 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 SLC9A7Q96T83 725 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 GAD1Q99259 594 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 LBHD1Q9BQE6 289 aaPredicted RBP9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TMEM175Q9BSA9 504 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 TTYH3Q9C0H2 523 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 GCNT4Q9P109 453 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
SNRPA-202ENST00000596860 HES2Q9Y543 173 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 SCN1AP35498 2009 aa9.46□□□□□ -0.9
SNRPA-202ENST00000596860 MKI67P46013 3256 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PES1O00541 588 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PIRO00625 290 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 HLA-DRAP01903 254 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 P4HA1P13674 534 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 AKAP5P24588 427 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 MLH1P40692 756 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 KCNJ6P48051 423 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 GSDMDP57764 484 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 TFAMQ00059 246 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 DSC1Q08554 894 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 CCDC173Q0VFZ6 552 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 TBX2Q13207 712 aaPredicted RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 TUSC3Q13454 348 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 BIRC3Q13489 604 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 NCOA4Q13772 614 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 SYCP1Q15431 976 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 TMEM240Q5SV17 173 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 KLHDC7AQ5VTJ3 777 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 DPY19L2P1Q6NXN4 242 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 CMTR2Q8IYT2 770 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 NEK11Q8NG66 645 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 OR5B17Q8NGF7 314 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 SYN2Q92777 582 aaPredicted RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 BADQ92934 168 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 ZMAT2Q96NC0 199 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 NT5C1BQ96P26 610 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 POP1Q99575 1024 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 MTMR12Q9C0I1 747 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 RC3H2Q9HBD1 1191 aaKnown RBP9.45□□□□□ -0.9
SNRPA-202ENST00000596860 GDAP2Q9NXN4 497 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 CEP72Q9P209 647 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 APEX2Q9UBZ4 518 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 STK39Q9UEW8 545 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PTPRJQ12913 1337 aa9.45□□□□□ -0.9
SNRPA-202ENST00000596860 PHACTR2O75167 634 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms