RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ANKRD42Q8N9B4 389 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 RMDN3Q96TC7 470 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 ADGRA3Q8IWK6 1321 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 TMEM120BA0PK00 339 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 NQO1P15559 274 aaKnown RBP17.57■□□□□ 0.4
LIG1-206ENST00000594067 IVDP26440 423 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 HSPA1LP34931 641 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 AGAP11Q8TF27 550 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 NSMCE1Q8WV22 266 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 CEP170P1Q96L14 293 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 FBXL18Q96ME1 805 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 PDCD2LQ9BRP1 358 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 HOMER3Q9NSC5 361 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
LIG1-206ENST00000594067 A0A1B0GUA9 196 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 O00370 1275 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
LIG1-206ENST00000594067 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
LIG1-206ENST00000594067 ALADP13716 330 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 MYO1EQ12965 1108 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 PTK6Q13882 451 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 BICD1Q96G01 975 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 KCNK9Q9NPC2 374 aa17.57■□□□□ 0.4
LIG1-206ENST00000594067 TCP11X1B4DZS4 312 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 PLSCR1O15162 318 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ANP32DO95626 131 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 SSTR3P32745 418 aaPredicted RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 KRT76Q01546 638 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 VSTM1Q6UX27 236 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 GPD1LQ8N335 351 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 L3MBTL3Q96JM7 780 aaPredicted RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 SERPINB12Q96P63 405 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 SLC38A10Q9HBR0 1119 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 FGFR1OP2Q9NVK5 253 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 WDR46O15213 610 aaKnown RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 TTC4O95801 387 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ATF2P15336 505 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 SFNP31947 248 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ADCY8P40145 1251 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 GHRHRQ02643 423 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 MAB21L3Q8N8X9 362 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 CCHCR1Q8TD31 782 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ZNF516Q92618 1163 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 FAM212AQ96EL1 285 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 THOC1Q96FV9 657 aaKnown RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 DDX27Q96GQ7 796 aaKnown RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 ECT2Q9H8V3 914 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 PXMP2Q9NR77 195 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
LIG1-206ENST00000594067 C1orf112Q9NSG2 853 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 ANAPC5Q9UJX4 755 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 TELO2Q9Y4R8 837 aa17.56■□□□□ 0.4
LIG1-206ENST00000594067 THAP12O43422 761 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 GTF2H1P32780 548 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 GCNT1Q02742 428 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 USP37Q86T82 979 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 FAXDC2Q96IV6 333 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 RSRC1Q96IZ7 334 aaKnown RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 C15orf41Q9Y2V0 281 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 ZNF862O60290 1169 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 GAS8O95995 478 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 RALAP11233 206 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 GJC1P36383 396 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 SLC8A3P57103 927 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 SP4Q02446 784 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 BNIP1Q12981 228 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 SPOPLQ6IQ16 392 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 GDAP1Q8TB36 358 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 NINJ2Q9NZG7 142 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 TBK1Q9UHD2 729 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 CTDP1Q9Y5B0 961 aaPredicted RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 SORBS3O60504 671 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 CFHP08603 1231 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 NSFP46459 744 aaKnown RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 PRUNE1Q86TP1 453 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 PASD1Q8IV76 773 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 CYP4X1Q8N118 509 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 ATL2Q8NHH9 583 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 GRK7Q8WTQ7 553 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 MAIP1Q8WWC4 291 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 SPIRE2Q8WWL2 714 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 AVENQ9NQS1 362 aaPredicted RBP17.55■□□□□ 0.4
LIG1-206ENST00000594067 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.55■□□□□ 0.4
LIG1-206ENST00000594067 PCDHA10Q9Y5I2 948 aa17.55■□□□□ 0.4
LIG1-206ENST00000594067 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
LIG1-206ENST00000594067 PAX7P23759 505 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 MPP2Q14168 576 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 NAA25Q14CX7 972 aa17.54■□□□□ 0.4
LIG1-206ENST00000594067 C11orf70Q9BRQ4 267 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms