RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ARPP19P56211 112 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 CACNB1Q02641 598 aaPredicted RBP22.39■■□□□ 1.17
TRIM47-207ENST00000593089 HYIQ5T013 277 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 SYT2Q8N9I0 419 aaPredicted RBP22.39■■□□□ 1.17
TRIM47-207ENST00000593089 SPIRE2Q8WWL2 714 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 ING5Q8WYH8 240 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 TMX3Q96JJ7 454 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 NTPCRQ9BSD7 190 aaKnown RBP22.39■■□□□ 1.17
TRIM47-207ENST00000593089 SMTNP53814 917 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 SLC8B1Q6J4K2 584 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 PHLDB3Q6NSJ2 640 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 RTL10Q7L3V2 364 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 NPAS3Q8IXF0 933 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 TMEM161BQ8NDZ6 487 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 KXD1Q9BQD3 176 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 MRPS23Q9Y3D9 190 aaKnown RBP22.38■■□□□ 1.17
TRIM47-207ENST00000593089 SIT1Q9Y3P8 196 aa22.38■■□□□ 1.17
TRIM47-207ENST00000593089 DMDP11532 3685 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 COL4A3Q01955 1670 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 NPHP3-ACAD11A0A0J9YXS1 232 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 WDR27A2RRH5 827 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 SYN3O14994 580 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 TOM1L1O75674 476 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 LRG1P02750 347 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 PLA2G4BP0C869 781 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 MAPTP10636 758 aaKnown RBP22.37■■□□□ 1.17
TRIM47-207ENST00000593089 ELF1P32519 619 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 RPL9P32969 192 aaKnown RBP22.37■■□□□ 1.17
TRIM47-207ENST00000593089 MATR3P43243 847 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIM47-207ENST00000593089 SLC12A3P55017 1021 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 NOLC1Q14978 699 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIM47-207ENST00000593089 ZNF461Q8TAF7 563 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 FOXQ1Q9C009 403 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 KCNG1Q9UIX4 513 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 KCNH3Q9ULD8 1083 aa22.37■■□□□ 1.17
TRIM47-207ENST00000593089 H7C4K7 107 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 PRRG1O14668 218 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 ABLIM3O94929 683 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 CD2BP2O95400 341 aaKnown RBP22.36■■□□□ 1.17
TRIM47-207ENST00000593089 RHOP08100 348 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 MCM4P33991 863 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 SNW1Q13573 536 aaKnown RBP22.36■■□□□ 1.17
TRIM47-207ENST00000593089 SLC5A9Q2M3M2 681 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 SLC10A6Q3KNW5 377 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 KCTD17Q8N5Z5 321 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 MCRS1Q96EZ8 462 aa22.36■■□□□ 1.17
TRIM47-207ENST00000593089 CLDN3O15551 220 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 PTPN2P17706 415 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 STARD6P59095 220 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 CTXN3Q4LDR2 81 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 TMEM119Q4V9L6 283 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 ARL6IP4Q66PJ3 421 aaKnown RBP22.35■■□□□ 1.17
TRIM47-207ENST00000593089 ZPBP2Q6X784 338 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 PJA1Q8NG27 643 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 BICD1Q96G01 975 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 SHDQ96IW2 340 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 CYP4F11Q9HBI6 524 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 KCND2Q9NZV8 630 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 DLGAP2Q9P1A6 1054 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 TUBGCP4Q9UGJ1 667 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 FBXL5Q9UKA1 691 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 MIA3Q5JRA6 1907 aa22.35■■□□□ 1.17
TRIM47-207ENST00000593089 ARHGEF37A1IGU5 675 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 TBC1D4O60343 1298 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 LRRN2O75325 713 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 SEC24AO95486 1093 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 CXCL8P10145 99 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 ATF2P15336 505 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 SPAG1Q07617 926 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 MCL1Q07820 350 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 MRPL58Q14197 206 aaKnown RBP22.34■■□□□ 1.17
TRIM47-207ENST00000593089 TMEM130Q8N3G9 435 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 SUSD3Q96L08 255 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 HAPLN2Q9GZV7 340 aa22.34■■□□□ 1.17
TRIM47-207ENST00000593089 LARSQ9P2J5 1176 aaKnown RBP22.34■■□□□ 1.17
TRIM47-207ENST00000593089 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.17
TRIM47-207ENST00000593089 GLULP15104 373 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 CEBPBP17676 345 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 NCKAP1LP55160 1127 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 DHX8Q14562 1220 aaKnown RBP22.33■■□□□ 1.17
TRIM47-207ENST00000593089 MLF2Q15773 248 aaPredicted RBP22.33■■□□□ 1.17
TRIM47-207ENST00000593089 SLC44A4Q53GD3 710 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 ARSHQ5FYA8 562 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 ZNF280DQ6N043 979 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 TCEAL8Q8IYN2 117 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 ADSSL1Q8N142 457 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 DDX12PQ92771 950 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 CORO1BQ9BR76 489 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 SMC3Q9UQE7 1217 aa22.33■■□□□ 1.17
TRIM47-207ENST00000593089 CFAP54Q96N23 3096 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 POTEHQ6S545 545 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 HAUS6Q7Z4H7 955 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 APPL2Q8NEU8 664 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 REEP2Q9BRK0 252 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 INSL5Q9Y5Q6 135 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 R4GN57 208 aa22.32■■□□□ 1.16
TRIM47-207ENST00000593089 PTPRZ1P23471 2315 aaPredicted RBP22.31■■□□□ 1.16
TRIM47-207ENST00000593089 KANSL1LA0AUZ9 987 aa22.31■■□□□ 1.16
TRIM47-207ENST00000593089 H0YCG3 227 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms