RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KCTD10Q9H3F6 313 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ELAC1Q9H777 363 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 TYW1Q9NV66 732 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 TMEM161AQ9NX61 479 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 EPG5Q9HCE0 2579 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 GOLGA6L6A8MZA4 724 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 GNA14O95837 355 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 MCF2P10911 925 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 HARSP12081 509 aaKnown RBP12.92□□□□□ -0.34
DDX39A-219ENST00000592927 ITGA4P13612 1032 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 PROZP22891 400 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 HOXD13P35453 343 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 MCL1Q07820 350 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39A-219ENST00000592927 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 MRPL10Q7Z7H8 261 aaKnown RBP12.92□□□□□ -0.34
DDX39A-219ENST00000592927 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
DDX39A-219ENST00000592927 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 POMGNT1Q8WZA1 660 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 PHF7Q9BWX1 381 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-219ENST00000592927 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 LMAN2LQ9H0V9 348 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 CDT1Q9H211 546 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 IKZF4Q9H2S9 585 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 IFNKQ9P0W0 207 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 IPPQ9Y573 584 aa12.92□□□□□ -0.34
DDX39A-219ENST00000592927 KCNJ18B7U540 433 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 ANKRD63C9JTQ0 380 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 ABLIM1O14639 778 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 HOXA2O43364 376 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 TPM2P07951 284 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
DDX39A-219ENST00000592927 CTNNB1P35222 781 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 KCNJ12Q14500 433 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 HS2ST1Q7LGA3 356 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
DDX39A-219ENST00000592927 SMRP1Q8NCR6 262 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 SMG8Q8ND04 991 aaKnown RBP12.91□□□□□ -0.34
DDX39A-219ENST00000592927 TMEM174Q8WUU8 243 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 LPPQ93052 612 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 APOL6Q9BWW8 343 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 XPO4Q9C0E2 1151 aaKnown RBP12.91□□□□□ -0.34
DDX39A-219ENST00000592927 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
DDX39A-219ENST00000592927 UBN1Q9NPG3 1134 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 PARP2Q9UGN5 583 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 HES2Q9Y543 173 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
DDX39A-219ENST00000592927 A0A0B4J269 797 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 A0A1B0GTH6 734 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 TISP43B9A030 160 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 CETN3O15182 167 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 TGFB1I1O43294 461 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 FGFR1P11362 822 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 GARTP22102 1010 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 GRM5P41594 1212 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 MYBPC2Q14324 1141 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 KYAT1Q16773 422 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 HS1BP3Q53T59 392 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 GLB1LQ6UWU2 654 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 DRC7Q8IY82 874 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 THNSL1Q8IYQ7 743 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 KIAA2013Q8IYS2 634 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 CNOT6LQ96LI5 555 aaKnown RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 USP15Q9Y4E8 981 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-219ENST00000592927 ZMYM2Q9UBW7 1377 aa12.9□□□□□ -0.34
DDX39A-219ENST00000592927 VPS13AQ96RL7 3174 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 MEIS3P2A8K0S8 358 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 C5orf67F2Z3F1 127 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 OGTO15294 1046 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 SLC16A3O15427 465 aaKnown RBP12.89□□□□□ -0.35
DDX39A-219ENST00000592927 DGKIO75912 1065 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 RB1P06400 928 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 AKAP5P24588 427 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 ADSSP30520 456 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 BMPR1AP36894 532 aa12.89□□□□□ -0.35
DDX39A-219ENST00000592927 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
DDX39A-219ENST00000592927 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms